PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
54451-54500 / 86044 show all | |||||||||||||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 100.0000 | 99.0099 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m1_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 100.0000 | 99.1304 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 93.7500 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 100.0000 | 99.1525 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e1 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 93.7500 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_l150_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m1_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m1_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e1 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e1 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_l250_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | map_siren | * | 0.0000 | 0.0000 | 84.6154 | 95.9752 | 0 | 0 | 11 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | C6_15 | map_siren | het | 0.0000 | 0.0000 | 100.0000 | 97.3856 | 0 | 0 | 4 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | map_siren | hetalt | 0.0000 | 0.0000 | 75.0000 | 92.5926 | 0 | 0 | 3 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | C6_15 | map_siren | homalt | 0.0000 | 0.0000 | 80.0000 | 95.6897 | 0 | 0 | 4 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | C6_15 | segdup | * | 0.0000 | 0.0000 | 80.0000 | 98.4127 | 0 | 0 | 4 | 1 | 0 | 0.0000 | |
| eyeh-varpipe | INDEL | C6_15 | segdup | het | 0.0000 | 0.0000 | 100.0000 | 99.2248 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | segdup | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.6111 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | segdup | homalt | 0.0000 | 0.0000 | 66.6667 | 97.3684 | 0 | 0 | 2 | 1 | 0 | 0.0000 | |
| eyeh-varpipe | INDEL | C6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | tech_badpromoters | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | tech_badpromoters | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | C6_15 | tech_badpromoters | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | D16_PLUS | * | * | 59.3408 | 53.1250 | 67.2039 | 51.2916 | 3604 | 3180 | 3586 | 1750 | 1709 | 97.6571 | |
| eyeh-varpipe | INDEL | D16_PLUS | * | het | 74.8225 | 76.6382 | 73.0908 | 51.0116 | 2421 | 738 | 2230 | 821 | 811 | 98.7820 | |
| eyeh-varpipe | INDEL | D16_PLUS | * | hetalt | 28.3581 | 16.7098 | 93.6210 | 67.5396 | 323 | 1610 | 499 | 34 | 33 | 97.0588 | |
| eyeh-varpipe | INDEL | D16_PLUS | * | homalt | 49.8532 | 50.8274 | 48.9155 | 43.2091 | 860 | 832 | 857 | 895 | 865 | 96.6480 | |