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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1060 1061 1062 1063 1064 1065 1066 1067 1068 ... 1720 1721 » 53151-53200 / 86044 show all
gduggal-bwafb	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	53.1915	22	0	22	0	0
gduggal-bwafb	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	33.3333	8	0	8	0	0
gduggal-bwafb	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	75.0000	1	0	1	0	0
gduggal-bwafb	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
gduggal-bwafb	INDEL	I6_15	*	*	87.8626	81.3399	95.5225	40.4474	20191	4632	21206	994	970	97.5855
gduggal-bwafb	INDEL	I6_15	*	het	88.0827	80.5342	97.1926	38.4775	8080	1953	13848	400	379	94.7500
gduggal-bwafb	INDEL	I6_15	*	hetalt	81.7221	72.8336	93.0818	54.0993	6228	2323	1480	110	109	99.0909
gduggal-bwafb	INDEL	I6_15	*	homalt	93.3335	94.2940	92.3923	40.2909	5883	356	5878	484	482	99.5868
gduggal-bwafb	INDEL	I6_15	HG002complexvar	*	87.6466	81.2187	95.1793	49.2161	3892	900	4008	203	196	96.5517
gduggal-bwafb	INDEL	I6_15	HG002complexvar	het	87.7628	80.4671	96.5134	49.2661	1895	460	2602	94	89	94.6809
gduggal-bwafb	INDEL	I6_15	HG002complexvar	hetalt	81.3403	72.5266	92.5926	62.9291	887	336	300	24	23	95.8333
gduggal-bwafb	INDEL	I6_15	HG002complexvar	homalt	92.1427	91.4333	92.8631	43.3935	1110	104	1106	85	84	98.8235
gduggal-bwafb	INDEL	I6_15	HG002compoundhet	*	80.9656	72.6869	91.3725	27.9246	6379	2397	7403	699	688	98.4263
gduggal-bwafb	INDEL	I6_15	HG002compoundhet	het	78.5751	65.8654	97.3628	22.2080	137	71	5907	160	152	95.0000
gduggal-bwafb	INDEL	I6_15	HG002compoundhet	hetalt	82.7582	72.8242	95.8306	40.7336	6217	2320	1471	64	63	98.4375
gduggal-bwafb	INDEL	I6_15	HG002compoundhet	homalt	9.4162	80.6452	5.0000	41.3146	25	6	25	475	473	99.5789
gduggal-bwafb	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	func_cds	*	90.0000	83.7209	97.2973	35.0877	36	7	36	1	1	100.0000
gduggal-bwafb	INDEL	I6_15	func_cds	het	90.9091	83.3333	100.0000	40.0000	20	4	21	0	0
gduggal-bwafb	INDEL	I6_15	func_cds	hetalt	50.0000	50.0000	50.0000	33.3333	2	2	1	1	1	100.0000
gduggal-bwafb	INDEL	I6_15	func_cds	homalt	96.5517	93.3333	100.0000	26.3158	14	1	14	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	65.0432	50.9569	89.8925	58.2960	426	410	418	47	47	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	67.1080	54.2510	87.9518	61.8098	134	113	219	30	30	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	63.0031	47.3585	94.0828	47.0219	251	279	159	10	10	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	76.5104	69.4915	85.1064	67.3611	41	18	40	7	7	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	81.8219	73.9368	91.5896	61.6810	3929	1385	2973	273	264	96.7033
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	81.8829	73.3939	92.5926	62.2269	1131	410	1825	146	139	95.2055
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	80.3666	72.7564	89.7547	59.7561	2270	850	622	71	71	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	85.3531	80.8576	90.3780	61.9856	528	125	526	56	54	96.4286
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	78.6020	69.2502	90.8738	58.9733	4378	1944	3515	353	342	96.8839
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	77.8141	67.6306	91.6078	59.9900	1333	638	2205	202	194	96.0396
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	77.2155	68.0091	89.3048	56.7130	2398	1128	668	80	79	98.7500
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	83.8326	78.4242	90.0421	57.6603	647	178	642	71	69	97.1831
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	75.6619	66.8539	87.1429	65.7702	119	59	122	18	18	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	80.4374	75.3086	86.3158	64.6840	61	20	82	13	13	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	65.6064	54.0984	83.3333	66.0377	33	28	15	3	3	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	79.3651	69.4444	92.5926	68.9655	25	11	25	2	2	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0

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