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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
44851-44900 / 86044 show all
gduggal-snapplatINDELI1_5*het
74.5979
72.6661
76.6351
71.5717
57436216055802217690370
2.0916
gduggal-snapplatINDELI1_5*hetalt
55.9163
41.4113
86.0603
83.9805
463665594655754516
68.4350
gduggal-snapplatINDELI1_5*homalt
83.6103
76.4695
92.2220
62.8436
4620914219467043939356
9.0378
gduggal-snapplatINDELI1_5HG002complexvar*
77.0714
71.7352
83.2654
65.6966
239339430243014884375
7.6781
gduggal-snapplatINDELI1_5HG002complexvarhet
73.7898
70.2842
77.6634
67.6709
127845405129763732123
3.2958
gduggal-snapplatINDELI1_5HG002complexvarhetalt
55.6197
42.0046
82.2940
85.5161
7251001739159112
70.4403
gduggal-snapplatINDELI1_5HG002complexvarhomalt
83.8960
77.5134
91.4241
57.4270
10424302410586993140
14.0987
gduggal-snapplatINDELI1_5HG002compoundhet*
48.1810
42.2143
56.1120
77.8637
5216714054124233851
20.1039
gduggal-snapplatINDELI1_5HG002compoundhethet
19.8395
43.8824
12.8171
74.6754
3734774853299129
3.9103
gduggal-snapplatINDELI1_5HG002compoundhethetalt
56.9417
41.4601
90.8753
78.7291
463465434651467392
83.9400
gduggal-snapplatINDELI1_5HG002compoundhethomalt
46.8802
63.5258
37.1467
83.7347
209120276467330
70.6638
gduggal-snapplatINDELI1_5decoy*
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5decoyhet
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5decoyhetalt
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5decoyhomalt
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5func_cds*
72.3894
69.4444
75.5952
55.4377
12555127411
2.4390
gduggal-snapplatINDELI1_5func_cdshet
52.4590
54.2373
50.7937
72.0000
322732310
0.0000
gduggal-snapplatINDELI1_5func_cdshetalt
0.0000
100.0000
02000
gduggal-snapplatINDELI1_5func_cdshomalt
83.8633
78.1513
90.4762
30.4636
932695101
10.0000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
29.9351
28.5016
31.5205
88.2158
5251317539117152
4.4407
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
23.7011
34.8943
17.9449
88.9091
231431241110210
0.9074
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
30.4360
18.8406
79.1469
74.6699
1697281674435
79.5455
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
57.8898
44.1696
83.9744
90.0574
125158131257
28.0000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
47.5340
42.9094
53.2758
84.2729
6684889368556012485
8.0672
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
37.4948
41.7896
34.0005
84.4865
255035522650514458
1.1275
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
56.0755
41.6302
85.8726
84.0433
247234662480408341
83.5784
gduggal-snapplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
58.9132
46.9890
78.9474
83.7848
16621875172546086
18.6957
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
41.7638
36.3625
49.0496
86.4561
58461023159876219484
7.7826
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
31.6043
34.3302
29.2795
88.3797
220442162292553684
1.5173
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
51.4209
36.9403
84.5736
68.1324
217837182182398329
82.6633
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
53.2289
38.9258
84.1491
87.7362
14642297151328571
24.9123
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
48.9473
54.4444
44.4584
86.7689
34328735344111
2.4943
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
40.5092
55.2023
31.9936
87.5351
1911551994234
0.9456
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
58.9713
44.0476
89.1892
83.3333
37473342
50.0000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
70.0566
57.5000
89.6296
82.8897
11585121145
35.7143
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
45.3594
46.8085
43.9974
84.7177
63872566784919
2.2379
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
38.0210
46.1837
32.3103
83.9205
3574163797948
1.0076
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
52.9704
41.0714
74.5763
89.3694
466644154
26.6667
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
62.5395
49.1632
85.9155
86.2802
235243244407
17.5000
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
45.2707
43.8743
46.7588
85.7511
41953644050111
2.1956
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
38.8523
42.9872
35.4430
84.3564
2363132524594
0.8715
gduggal-snapplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
50.2732
40.0000
67.6471
91.9622
243623112
18.1818