PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Challenge Closed
View Responses
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Reset
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42901-42950 / 86044 show all
gduggal-snapfbSNPtvmap_l100_m1_e0*
97.5300
97.9838
97.0805
69.8683
2400749424008722232
32.1330
gduggal-snapfbSNPtvmap_l100_m1_e0het
97.0635
98.4108
95.7526
68.5715
1517224515172673223
33.1352
gduggal-snapfbSNPtvmap_l100_m1_e0hetalt
93.9759
95.1220
92.8571
85.7627
3923930
0.0000
gduggal-snapfbSNPtvmap_l100_m1_e0homalt
98.3618
97.2686
99.4798
71.8035
87962478797469
19.5652
gduggal-snapfbSNPtvmap_l100_m2_e0*
97.5647
98.0226
97.1111
71.6649
2453849524539730232
31.7808
gduggal-snapfbSNPtvmap_l100_m2_e0het
97.1053
98.4471
95.7997
70.6844
1553224515532681223
32.7460
gduggal-snapfbSNPtvmap_l100_m2_e0hetalt
94.1176
95.2381
93.0233
86.3924
4024030
0.0000
gduggal-snapfbSNPtvmap_l100_m2_e0homalt
98.3869
97.3084
99.4896
73.1420
89662488967469
19.5652
gduggal-snapfbSNPtvmap_l100_m2_e1*
97.5848
98.0422
97.1318
71.7053
2478849524789732232
31.6940
gduggal-snapfbSNPtvmap_l100_m2_e1het
97.1282
98.4628
95.8293
70.7561
1569324515693683223
32.6501
gduggal-snapfbSNPtvmap_l100_m2_e1hetalt
94.2529
95.3488
93.1818
86.1635
4124130
0.0000
gduggal-snapfbSNPtvmap_l100_m2_e1homalt
98.4024
97.3339
99.4946
73.1383
90542489055469
19.5652
gduggal-snapfbSNPtvmap_l125_m0_e0*
95.3719
95.7171
95.0292
79.3444
63472846347332129
38.8554
gduggal-snapfbSNPtvmap_l125_m0_e0het
94.9693
96.7280
93.2734
75.1430
42571444257307123
40.0651
gduggal-snapfbSNPtvmap_l125_m0_e0hetalt
94.1176
88.8889
100.0000
94.7020
81800
gduggal-snapfbSNPtvmap_l125_m0_e0homalt
96.2107
93.7416
98.8135
84.7573
20821392082256
24.0000
gduggal-snapfbSNPtvmap_l125_m1_e0*
96.8139
97.2340
96.3974
74.1586
1557344315573582212
36.4261
gduggal-snapfbSNPtvmap_l125_m1_e0het
96.2891
97.8866
94.7429
72.1296
99122149912550205
37.2727
gduggal-snapfbSNPtvmap_l125_m1_e0hetalt
91.8033
93.3333
90.3226
86.9198
2822830
0.0000
gduggal-snapfbSNPtvmap_l125_m1_e0homalt
97.7782
96.1263
99.4878
77.1149
56332275633297
24.1379
gduggal-snapfbSNPtvmap_l125_m2_e0*
96.8780
97.2952
96.4644
75.8291
1604344616043588214
36.3946
gduggal-snapfbSNPtvmap_l125_m2_e0het
96.3724
97.9506
94.8442
74.2096
1022821410228556207
37.2302
gduggal-snapfbSNPtvmap_l125_m2_e0hetalt
91.8033
93.3333
90.3226
87.8431
2822830
0.0000
gduggal-snapfbSNPtvmap_l125_m2_e0homalt
97.8112
96.1775
99.5014
78.2474
57872305787297
24.1379
gduggal-snapfbSNPtvmap_l125_m2_e1*
96.8978
97.3224
96.4768
75.8806
1621144616211592214
36.1486
gduggal-snapfbSNPtvmap_l125_m2_e1het
96.3919
97.9721
94.8619
74.2875
1033921410339560207
36.9643
gduggal-snapfbSNPtvmap_l125_m2_e1hetalt
91.8033
93.3333
90.3226
87.9377
2822830
0.0000
gduggal-snapfbSNPtvmap_l125_m2_e1homalt
97.8321
96.2134
99.5062
78.2651
58442305844297
24.1379
gduggal-snapfbSNPtvmap_l150_m0_e0*
94.8348
95.2324
94.4405
83.5277
3975199397523489
38.0342
gduggal-snapfbSNPtvmap_l150_m0_e0het
94.5988
96.4122
92.8523
78.6628
2741102274121184
39.8104
gduggal-snapfbSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.6744
30300
gduggal-snapfbSNPtvmap_l150_m0_e0homalt
95.3524
92.6958
98.1659
89.1785
1231971231235
21.7391
gduggal-snapfbSNPtvmap_l150_m1_e0*
96.2193
96.5634
95.8777
77.9802
1053737510536453179
39.5143
gduggal-snapfbSNPtvmap_l150_m1_e0het
95.6989
97.3798
94.0751
75.4297
67641826764426173
40.6103
gduggal-snapfbSNPtvmap_l150_m1_e0hetalt
92.3077
90.0000
94.7368
90.6404
1821810
0.0000
gduggal-snapfbSNPtvmap_l150_m1_e0homalt
97.1916
95.1597
99.3122
81.5059
37551913754266
23.0769
gduggal-snapfbSNPtvmap_l150_m2_e0*
96.3189
96.6711
95.9692
79.3481
1097737810976461180
39.0456
gduggal-snapfbSNPtvmap_l150_m2_e0het
95.8184
97.4766
94.2156
77.2326
70691837069434174
40.0922
gduggal-snapfbSNPtvmap_l150_m2_e0hetalt
92.3077
90.0000
94.7368
91.0798
1821810
0.0000
gduggal-snapfbSNPtvmap_l150_m2_e0homalt
97.2621
95.2731
99.3359
82.3744
38901933889266
23.0769
gduggal-snapfbSNPtvmap_l150_m2_e1*
96.3446
96.7049
95.9869
79.3609
1112337911122465180
38.7097
gduggal-snapfbSNPtvmap_l150_m2_e1het
95.8395
97.4959
94.2384
77.2735
71641847164438174
39.7260
gduggal-snapfbSNPtvmap_l150_m2_e1hetalt
92.3077
90.0000
94.7368
91.1215
1821810
0.0000
gduggal-snapfbSNPtvmap_l150_m2_e1homalt
97.2966
95.3314
99.3444
82.3553
39411933940266
23.0769
gduggal-snapfbSNPtvmap_l250_m0_e0*
93.9650
94.6405
93.2990
94.3329
724417245212
23.0769
gduggal-snapfbSNPtvmap_l250_m0_e0het
93.7015
94.9301
92.5043
90.6200
54329543449
20.4545
gduggal-snapfbSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbSNPtvmap_l250_m0_e0homalt
94.7644
93.7824
95.7672
97.4314
1811218183
37.5000
gduggal-snapfbSNPtvmap_l250_m1_e0*
94.8003
95.0510
94.5509
89.8505
2516131251614553
36.5517
gduggal-snapfbSNPtvmap_l250_m1_e0het
94.3085
95.9709
92.7027
86.6223
171572171513548
35.5556