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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 849 850 851 852 853 854 855 856 857 ... 1720 1721 » 42601-42650 / 86044 show all
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	87.6693	98.8054	78.7892	66.3228	27625	334	27904	7512	326	4.3397
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	83.6868	98.6611	72.6589	66.9839	17612	239	17869	6724	214	3.1826
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	9.6000	100.0000	5.0420	75.4132	6	0	6	113	2	1.7699
gduggal-snapfb	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.3021	99.0596	93.6939	64.5457	10007	95	10029	675	110	16.2963
gduggal-snapfb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	81.9557	95.2253	71.9321	77.0498	29656	1487	30041	11722	436	3.7195
gduggal-snapfb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	76.4238	95.1325	63.8642	77.1773	18626	953	18983	10741	319	2.9699
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e0	*		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e0	het		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_siren	*		0.0000	0.0000	0.0000	0	86	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_siren	het		0.0000	0.0000	0.0000	0	49	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_siren	hetalt		0.0000	0.0000	0.0000	0	16	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	map_siren	homalt		0.0000	0.0000	0.0000	0	21	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdup	*		0.0000	0.0000	0.0000	0	47	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdup	het		0.0000	0.0000	0.0000	0	24	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdup	homalt		0.0000	0.0000	0.0000	0	19	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	tech_badpromoters	*		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	tech_badpromoters	het		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapfb	INDEL	I1_5	*	*	94.6996	95.8769	93.5508	58.0186	144452	6212	145507	10031	3046	30.3659
gduggal-snapfb	INDEL	I1_5	*	het	94.5346	97.1091	92.0931	57.7460	76756	2285	82322	7068	1603	22.6797
gduggal-snapfb	INDEL	I1_5	*	hetalt	80.2098	77.5793	83.0249	77.6167	8685	2510	4128	844	445	52.7251
gduggal-snapfb	INDEL	I1_5	*	homalt	97.0924	97.6551	96.5362	55.2565	59011	1417	59057	2119	998	47.0977
gduggal-snapfb	INDEL	I1_5	HG002complexvar	*	93.5109	94.6378	92.4106	55.4813	31574	1789	31902	2620	888	33.8931
gduggal-snapfb	INDEL	I1_5	HG002complexvar	het	93.2070	95.4203	91.0940	55.8992	17356	833	18135	1773	467	26.3395
gduggal-snapfb	INDEL	I1_5	HG002complexvar	hetalt	73.7418	73.4647	74.0210	78.5933	1268	458	775	272	170	62.5000
gduggal-snapfb	INDEL	I1_5	HG002complexvar	homalt	96.0286	96.2968	95.7618	50.6870	12950	498	12992	575	251	43.6522
gduggal-snapfb	INDEL	I1_5	HG002compoundhet	*	77.3920	77.8731	76.9169	63.1671	9622	2734	10473	3143	1735	55.2020
gduggal-snapfb	INDEL	I1_5	HG002compoundhet	het	76.4321	76.3529	76.5115	47.4370	649	201	6049	1857	595	32.0409
gduggal-snapfb	INDEL	I1_5	HG002compoundhet	hetalt	85.0180	77.5969	94.0087	72.7861	8673	2504	4111	262	204	77.8626
gduggal-snapfb	INDEL	I1_5	HG002compoundhet	homalt	37.2562	91.1854	23.4106	77.1726	300	29	313	1024	936	91.4062
gduggal-snapfb	INDEL	I1_5	decoy	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I1_5	decoy	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I1_5	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I1_5	decoy	homalt		0.0000		100.0000	0	0	0	0	0

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