PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
41651-41700 / 86044 show all | |||||||||||||||
| gduggal-snapfb | INDEL | I6_15 | map_l100_m2_e0 | homalt | 82.1429 | 69.6970 | 100.0000 | 85.8896 | 23 | 10 | 23 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l100_m2_e1 | * | 81.0925 | 72.4138 | 92.1348 | 79.2056 | 84 | 32 | 82 | 7 | 6 | 85.7143 | |
| gduggal-snapfb | INDEL | I6_15 | map_l100_m2_e1 | het | 84.5604 | 78.6885 | 91.3793 | 74.8918 | 48 | 13 | 53 | 5 | 4 | 80.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 66.1017 | 59.0909 | 75.0000 | 72.4138 | 13 | 9 | 6 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l100_m2_e1 | homalt | 82.1429 | 69.6970 | 100.0000 | 86.3095 | 23 | 10 | 23 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l125_m0_e0 | * | 71.4286 | 66.6667 | 76.9231 | 86.8687 | 10 | 5 | 10 | 3 | 2 | 66.6667 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m0_e0 | het | 77.7778 | 77.7778 | 77.7778 | 82.3529 | 7 | 2 | 7 | 2 | 1 | 50.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 87.5000 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l125_m0_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 92.5000 | 3 | 3 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l125_m1_e0 | * | 81.2500 | 73.5849 | 90.6977 | 82.0084 | 39 | 14 | 39 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m1_e0 | het | 80.3653 | 73.3333 | 88.8889 | 78.9062 | 22 | 8 | 24 | 3 | 2 | 66.6667 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 77.4194 | 75.0000 | 80.0000 | 68.7500 | 6 | 2 | 4 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m1_e0 | homalt | 84.6154 | 73.3333 | 100.0000 | 88.4211 | 11 | 4 | 11 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e0 | * | 81.2500 | 73.5849 | 90.6977 | 84.4765 | 39 | 14 | 39 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e0 | het | 80.3653 | 73.3333 | 88.8889 | 82.0000 | 22 | 8 | 24 | 3 | 2 | 66.6667 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 77.4194 | 75.0000 | 80.0000 | 72.2222 | 6 | 2 | 4 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e0 | homalt | 84.6154 | 73.3333 | 100.0000 | 89.9083 | 11 | 4 | 11 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e1 | * | 81.2500 | 73.5849 | 90.6977 | 85.1724 | 39 | 14 | 39 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e1 | het | 80.3653 | 73.3333 | 88.8889 | 82.8025 | 22 | 8 | 24 | 3 | 2 | 66.6667 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 77.4194 | 75.0000 | 80.0000 | 72.2222 | 6 | 2 | 4 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l125_m2_e1 | homalt | 84.6154 | 73.3333 | 100.0000 | 90.4348 | 11 | 4 | 11 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m0_e0 | * | 71.4286 | 62.5000 | 83.3333 | 92.2078 | 5 | 3 | 5 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m0_e0 | het | 85.7143 | 75.0000 | 100.0000 | 92.1053 | 3 | 1 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 85.7143 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m0_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 93.7500 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m1_e0 | * | 77.2727 | 68.0000 | 89.4737 | 89.3258 | 17 | 8 | 17 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m1_e0 | het | 81.4815 | 73.3333 | 91.6667 | 87.2340 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 66.6667 | 66.6667 | 66.6667 | 75.0000 | 2 | 1 | 2 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m1_e0 | homalt | 72.7273 | 57.1429 | 100.0000 | 94.4444 | 4 | 3 | 4 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e0 | * | 77.2727 | 68.0000 | 89.4737 | 90.9091 | 17 | 8 | 17 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e0 | het | 81.4815 | 73.3333 | 91.6667 | 89.0909 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 66.6667 | 66.6667 | 66.6667 | 78.5714 | 2 | 1 | 2 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e0 | homalt | 72.7273 | 57.1429 | 100.0000 | 95.2941 | 4 | 3 | 4 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e1 | * | 79.1667 | 70.3704 | 90.4762 | 90.5830 | 19 | 8 | 19 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e1 | het | 82.7586 | 75.0000 | 92.3077 | 88.9831 | 12 | 4 | 12 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 66.6667 | 66.6667 | 66.6667 | 78.5714 | 2 | 1 | 2 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | I6_15 | map_l150_m2_e1 | homalt | 76.9231 | 62.5000 | 100.0000 | 94.5055 | 5 | 3 | 5 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m1_e0 | * | 83.3333 | 71.4286 | 100.0000 | 94.9495 | 5 | 2 | 5 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m1_e0 | het | 85.7143 | 75.0000 | 100.0000 | 94.4444 | 3 | 1 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m1_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 94.8718 | 2 | 1 | 2 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m2_e0 | * | 85.7143 | 75.0000 | 100.0000 | 94.6903 | 6 | 2 | 6 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m2_e0 | het | 88.8889 | 80.0000 | 100.0000 | 93.4426 | 4 | 1 | 4 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m2_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 95.6522 | 2 | 1 | 2 | 0 | 0 | ||
| gduggal-snapfb | INDEL | I6_15 | map_l250_m2_e1 | * | 85.7143 | 75.0000 | 100.0000 | 95.0413 | 6 | 2 | 6 | 0 | 0 | ||