PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 828 829 830 831 832 833 834 835 836 ... 1720 1721 » 41551-41600 / 86044 show all
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	67.2507	57.7531	80.4869	56.9596	3069	2245	2215	537	513	95.5307
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	69.0921	61.2589	79.2222	54.8419	944	597	1426	374	353	94.3850
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	68.1644	57.9487	82.7526	54.9804	1808	1312	475	99	96	96.9697
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	61.2790	48.5452	83.0688	66.6372	317	336	314	64	64	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	62.0536	50.9807	79.2711	51.4534	3223	3099	2436	637	614	96.3893
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	62.8725	52.4099	78.5542	50.1920	1033	938	1630	445	427	95.9551
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	63.4640	52.6659	79.8319	50.6633	1857	1669	475	120	116	96.6667
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	54.1272	40.3636	82.1340	57.9332	333	492	331	72	71	98.6111
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	53.0409	42.6966	70.0000	56.1753	76	102	77	33	31	93.9394
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	59.4318	53.0864	67.5000	54.5455	43	38	54	26	25	96.1538
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	48.7085	36.0656	75.0000	57.8947	22	39	12	4	3	75.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	44.0000	30.5556	78.5714	62.1622	11	25	11	3	3	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	63.1130	55.0847	73.8806	56.5640	195	159	198	70	62	88.5714
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	70.1721	68.3616	72.0812	51.2376	121	56	142	55	50	90.9091
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	52.1262	44.7059	62.5000	60.0000	38	47	20	12	9	75.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	54.9618	39.1304	92.3077	70.6767	36	56	36	3	3	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	66.4101	59.5041	75.1295	58.0435	144	98	145	48	41	85.4167
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	73.5213	72.9508	74.1007	51.5679	89	33	103	36	31	86.1111
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	51.1073	48.0769	54.5455	60.7143	25	27	12	10	8	80.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	60.0000	44.1176	93.7500	72.6496	30	38	30	2	2	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	41.1854	27.9851	77.9570	49.7297	150	386	145	41	41	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	40.9756	28.1879	75.0000	50.6849	42	107	81	27	27	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	43.4297	28.6501	89.7059	44.7154	104	259	61	7	7	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	21.4286	16.6667	30.0000	64.2857	4	20	3	7	7	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	67.8720	57.3310	83.1622	50.3568	2002	1490	1215	246	238	96.7480
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	66.4834	55.9299	81.9459	49.8917	415	327	758	167	160	95.8084
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	71.1515	58.0150	91.9786	49.4595	1473	1066	344	30	29	96.6667
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	60.8920	54.0284	69.7531	54.6218	114	97	113	49	49	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	71.3980	62.1268	83.9216	50.4662	1852	1129	1070	205	197	96.0976
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	70.8362	61.8574	82.8641	49.8157	373	230	677	140	133	95.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	74.5996	62.5114	92.4837	50.4052	1369	821	283	23	22	95.6522
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	64.7059	58.5106	72.3684	53.7994	110	78	110	42	42	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	66.8635	56.6333	81.6046	52.1656	2207	1690	1424	321	304	94.7040
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	66.6828	57.1125	80.1061	51.0601	538	404	906	225	212	94.2222
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	69.8922	57.3374	89.4866	50.3641	1516	1128	366	43	39	90.6977
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	59.1477	49.1961	74.1463	60.0390	153	158	152	53	53	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	62.0536	50.9807	79.2711	51.4534	3223	3099	2436	637	614	96.3893
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	62.8725	52.4099	78.5542	50.1920	1033	938	1630	445	427	95.9551
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	63.4640	52.6659	79.8319	50.6633	1857	1669	475	120	116	96.6667
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	54.1272	40.3636	82.1340	57.9332	333	492	331	72	71	98.6111
gduggal-snapfb	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	66.5297	57.6700	78.6058	62.8737	1391	1021	654	178	164	92.1348

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge