PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4051-4100 / 86044 show all
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.8289
94.4588
99.3210
38.8312
182410720481414
100.0000
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.8086
99.5997
98.0299
75.0492
1244512442520
80.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
97.9660
98.1027
97.8297
69.4907
17583417583930
76.9231
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
97.1826
99.5074
94.9640
83.8841
60635282821
75.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
97.8851
96.3010
99.5221
33.7816
7552983344
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
98.8792
99.4987
98.2673
65.6463
397239775
71.4286
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
92.5148
92.3810
92.6491
58.3237
679566685351
96.2264
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
77.5982
99.4083
63.6364
84.3528
1681704039
97.5000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
93.3542
87.6993
99.7886
34.9381
3855447211
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
95.0943
99.2126
91.3043
54.0000
12611261211
91.6667
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
98.3051
100.0000
96.6667
84.7973
8708730
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
97.9592
100.0000
96.0000
87.4687
5204820
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
54.2857
1201600
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
97.8723
100.0000
95.8333
84.8101
2302310
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
94.9640
97.0588
92.9577
96.7356
6626650
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
92.3077
95.4545
89.3617
96.6284
4224250
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
93.0233
90900
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.6994
1501500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
98.9022
98.6444
99.1614
72.5547
9461394686
75.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
99.1121
98.7531
99.4737
81.8095
396537821
50.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.3344
97.5610
99.1202
38.2246
320833833
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
99.3521
100.0000
98.7124
72.0958
230023032
66.6667
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
96.9781
96.7532
97.2039
68.0840
596205911715
88.2353
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
95.1642
98.7805
91.8033
88.0392
1622112108
80.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
96.8861
95.1429
98.6945
35.5219
3331737855
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
98.5366
99.0196
98.0583
64.6048
101110122
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
99.0536
100.0000
98.1250
68.1909
157015730
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
97.4790
100.0000
95.0820
79.2517
6105830
0.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
67.6259
4504500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
93.3333
91.3043
95.4545
68.1159
4244222
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
77.4194
75.0000
80.0000
92.3077
62411
100.0000
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
95.8333
92.0000
100.0000
44.4444
2322500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.2963
100.0000
92.8571
50.0000
1301311
100.0000
astatham-gatkINDELD16_PLUSmap_l100_m0_e0*
86.2069
89.2857
83.3333
96.8051
2532550
0.0000
astatham-gatkINDELD16_PLUSmap_l100_m0_e0het
84.4720
89.4737
80.0000
97.0545
1721640
0.0000
astatham-gatkINDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.5660
40500
astatham-gatkINDELD16_PLUSmap_l100_m0_e0homalt
80.0000
80.0000
80.0000
97.5845
41410
0.0000
astatham-gatkINDELD16_PLUSmap_l100_m1_e0*
89.2655
90.8046
87.7778
94.9153
79879114
36.3636
astatham-gatkINDELD16_PLUSmap_l100_m1_e0het
86.6603
93.4783
80.7692
95.8031
43342104
40.0000
astatham-gatkINDELD16_PLUSmap_l100_m1_e0hetalt
91.6667
84.6154
100.0000
78.7037
2242300
astatham-gatkINDELD16_PLUSmap_l100_m1_e0homalt
93.3333
93.3333
93.3333
96.4539
1411410
0.0000
astatham-gatkINDELD16_PLUSmap_l100_m2_e0*
89.1304
91.1111
87.2340
95.4369
82882124
33.3333
astatham-gatkINDELD16_PLUSmap_l100_m2_e0het
86.1148
93.7500
79.6296
96.2211
45343114
36.3636
astatham-gatkINDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
79.1304
2242400
astatham-gatkINDELD16_PLUSmap_l100_m2_e0homalt
93.7500
93.7500
93.7500
96.8992
1511510
0.0000