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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
39701-39750 / 86044 show all
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
61.9084
97.6773
45.3144
61.3396
5467130546966006491
98.3485
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.3230
0.0000
0.0000
226790000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
64.9017
48.2133
99.2588
53.0137
1754188417411310
76.9231
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
44.4394
41.1352
48.3208
59.7393
726910402722377257546
97.6828
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
58.7698
96.5789
42.2354
60.5712
5646200563877117534
97.7046
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.2482
0.0000
0.0000
208039000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
59.5561
42.5651
99.1245
51.1308
1603216315851412
85.7143
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
68.4671
69.3780
67.5799
76.7516
145641487149
69.0141
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
78.0258
97.6378
64.9746
77.1991
12431286947
68.1159
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
039000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
63.5401
48.8372
90.9091
71.7949
21222022
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
98.6755
22222
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.5455
20222
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
87.7617
87.8607
87.6630
63.7323
883122874123103
83.7398
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
90.1456
99.3056
82.5328
68.5151
5724567120100
83.3333
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
055000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
90.4018
83.1551
99.0323
45.3263
3116330733
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
90.8783
90.7300
91.0272
61.1646
783807717671
93.4211
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
92.6230
99.7947
86.4130
66.7870
48614777570
93.3333
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
033000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
92.6662
86.5889
99.6610
43.1599
2974629411
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
23.7409
20.8999
27.4757
50.6350
576218056614941477
98.8621
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
40.7774
89.1980
26.4300
49.8268
5456653614921475
98.8606
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0585
0.0000
0.0000
11707000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
12.7932
6.8650
93.7500
75.5725
304073022
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
92.3077
11111
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
91.6667
10111
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
37.1023
33.8847
40.9951
49.8226
46719114463966776648
99.5657
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
52.1766
96.2264
35.7920
50.1344
3723146371766686640
99.5801
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.2109
0.0000
0.0000
157097000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
49.8117
33.2739
99.0333
46.0603
933187192298
88.8889
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
40.2265
37.0781
43.9591
50.2516
41096973408652095192
99.6736
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
54.7290
97.4954
38.0419
50.8575
319282319452025186
99.6924
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.2574
0.0000
0.0000
145424000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
55.0595
38.1013
99.2214
43.7774
903146789276
85.7143
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
40.8104
37.5245
44.7270
52.3629
55489237550568036744
99.1327
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
55.2412
96.6262
38.6762
52.9026
4296150428367916733
99.1459
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.2091
0.0000
0.0000
157159000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
56.0471
39.0837
99.0276
46.9019
1237192812221211
91.6667
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
44.4394
41.1352
48.3208
59.7393
726910402722377257546
97.6828
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
58.7698
96.5789
42.2354
60.5712
5646200563877117534
97.7046
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.2482
0.0000
0.0000
208039000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
59.5561
42.5651
99.1245
51.1308
1603216315851412
85.7143
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
40.2625
37.4075
43.5894
47.0109
35385920351245454494
98.8779
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
53.6228
97.3655
37.0000
47.7504
266172266445364487
98.9198
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.3772
0.0000
0.0000
184754000