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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
34651-34700 / 86044 show all
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
01000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
94.7484
92.8627
96.7122
44.0182
19126147019885676622
92.0118
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
96.2475
93.6213
99.0253
42.3352
69134711259812472
58.0645
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
93.4068
87.9802
99.5467
30.4101
712297321961010
100.0000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
94.7163
99.4919
90.3781
51.0003
5091265091542540
99.6310
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
95.7473
94.3151
97.2237
42.8173
17221103817930512480
93.7500
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
97.0280
94.8346
99.3253
40.5686
6334345114827847
60.2564
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
94.6440
90.0688
99.7088
29.5734
6149678171255
100.0000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
95.5224
99.6844
91.6941
50.1544
4738154736429428
99.7669
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
94.8782
93.0607
96.7682
51.4476
20706154421469717639
89.1213
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.2950
93.8423
98.8793
50.2372
78795171358815479
51.2987
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
93.3120
87.8747
99.4664
36.3431
718299122371212
100.0000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
95.0569
99.3663
91.1057
57.4139
5645365644551548
99.4555
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
94.7146
92.7089
96.8091
59.8061
29118229029975988774
78.3401
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
95.6799
93.0581
98.4538
59.4166
1280295519039299108
36.1204
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
92.7620
87.2242
99.0507
45.1542
8104118727132626
100.0000
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
95.2994
98.2297
92.5388
63.5670
82121488223663640
96.5309
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
96.4108
95.2812
97.5675
40.2387
23382115824186603555
92.0398
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
97.6431
96.1084
99.2277
42.1750
100024051503211772
61.5385
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
94.3169
89.7764
99.3411
33.3446
618270419601313
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
96.4992
99.3239
93.8307
37.7780
7198497194473470
99.3658
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_51to200*
70.1122
60.5452
83.2700
54.5769
4222754388886
97.7273
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_51to200het
71.3699
57.0370
95.3237
59.0574
77582651311
84.6154
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
72.2230
56.8228
99.0741
25.0000
27921210711
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
62.5592
92.9577
47.1429
58.2090
665667474
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
99.5573
99.3217
99.7940
54.6839
25187172251855239
75.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.5418
99.2552
99.8299
54.5384
14660110146752512
48.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.2259
93.4307
99.1935
71.5379
3842736933
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7100
99.6561
99.7639
53.8981
1014335101412424
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
96.8644
95.1747
98.6151
48.2628
113025731132215995
59.7484
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
96.6527
94.4759
98.9323
48.2177
634537170427621
27.6316
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
95.1686
91.6276
98.9943
43.0908
136812568977
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
97.9135
97.8996
97.9275
49.2246
35897735917667
88.1579
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
85.4267
79.7078
92.0297
56.2094
9822509938652
60.4651
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
83.1767
75.0649
93.2540
64.2807
28996470347
20.5882
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
86.4554
77.3846
97.9351
23.6486
50314733277
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
88.0110
96.4467
80.9322
61.2479
19071914538
84.4444
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
98.7659
98.1114
99.4293
42.4615
40007740072316
69.5652
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
98.5655
97.5492
99.6032
43.6746
2229562510103
30.0000