PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
33951-34000 / 86044 show all | |||||||||||||||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m1_e0 | het | 83.1683 | 71.1864 | 100.0000 | 81.5094 | 42 | 17 | 49 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m1_e0 | hetalt | 84.2105 | 72.7273 | 100.0000 | 80.0000 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m1_e0 | homalt | 93.7500 | 90.9091 | 96.7742 | 81.7647 | 30 | 3 | 30 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | * | 86.3981 | 76.7241 | 98.8636 | 82.8460 | 89 | 27 | 87 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | het | 82.6923 | 70.4918 | 100.0000 | 82.5175 | 43 | 18 | 50 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | hetalt | 84.2105 | 72.7273 | 100.0000 | 80.5556 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | homalt | 93.7500 | 90.9091 | 96.7742 | 83.7696 | 30 | 3 | 30 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | * | 86.3981 | 76.7241 | 98.8636 | 83.1740 | 89 | 27 | 87 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | het | 82.6923 | 70.4918 | 100.0000 | 82.8179 | 43 | 18 | 50 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 84.2105 | 72.7273 | 100.0000 | 81.0811 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | homalt | 93.7500 | 90.9091 | 96.7742 | 84.1026 | 30 | 3 | 30 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m0_e0 | * | 81.4815 | 73.3333 | 91.6667 | 91.5493 | 11 | 4 | 11 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m0_e0 | het | 71.4286 | 55.5556 | 100.0000 | 93.7500 | 5 | 4 | 5 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m0_e0 | homalt | 92.3077 | 100.0000 | 85.7143 | 86.7925 | 6 | 0 | 6 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | * | 83.8710 | 73.5849 | 97.5000 | 86.4865 | 39 | 14 | 39 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | het | 72.3404 | 56.6667 | 100.0000 | 88.3721 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 77.7778 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | homalt | 96.7742 | 100.0000 | 93.7500 | 84.9057 | 15 | 0 | 15 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | * | 83.8710 | 73.5849 | 97.5000 | 88.4058 | 39 | 14 | 39 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | het | 72.3404 | 56.6667 | 100.0000 | 90.0498 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 80.9524 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | homalt | 96.7742 | 100.0000 | 93.7500 | 86.9919 | 15 | 0 | 15 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | * | 83.8710 | 73.5849 | 97.5000 | 88.7955 | 39 | 14 | 39 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | het | 72.3404 | 56.6667 | 100.0000 | 90.3382 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 93.3333 | 87.5000 | 100.0000 | 80.9524 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | homalt | 96.7742 | 100.0000 | 93.7500 | 87.5969 | 15 | 0 | 15 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | * | 85.7143 | 75.0000 | 100.0000 | 94.8718 | 6 | 2 | 6 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | het | 66.6667 | 50.0000 | 100.0000 | 97.1429 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 4 | 0 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | * | 84.4444 | 76.0000 | 95.0000 | 91.4530 | 19 | 6 | 19 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | het | 75.0000 | 60.0000 | 100.0000 | 92.8058 | 9 | 6 | 10 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 84.6154 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | homalt | 93.3333 | 100.0000 | 87.5000 | 90.2439 | 7 | 0 | 7 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | * | 84.4444 | 76.0000 | 95.0000 | 92.6740 | 19 | 6 | 19 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | het | 75.0000 | 60.0000 | 100.0000 | 93.6306 | 9 | 6 | 10 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 88.2353 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | homalt | 93.3333 | 100.0000 | 87.5000 | 91.9192 | 7 | 0 | 7 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | * | 85.7143 | 77.7778 | 95.4545 | 92.3345 | 21 | 6 | 21 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | het | 76.9231 | 62.5000 | 100.0000 | 93.3333 | 10 | 6 | 11 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 88.2353 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | homalt | 94.1176 | 100.0000 | 88.8889 | 91.4286 | 8 | 0 | 8 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.4127 | 1 | 0 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.0000 | 1 | 0 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m1_e0 | * | 76.9231 | 71.4286 | 83.3333 | 95.6522 | 5 | 2 | 5 | 1 | 1 | 100.0000 | |
| gduggal-bwafb | INDEL | I6_15 | map_l250_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 97.5000 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||