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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 648 649 650 651 652 653 654 655 656 ... 1720 1721 » 32551-32600 / 86044 show all
eyeh-varpipe	SNP	*	segdupwithalt	*	0.0000	0.0000	50.0000	99.9991	0	0	1	1	0	0.0000
eyeh-varpipe	SNP	*	segdupwithalt	het		0.0000	0.0000	99.9994	0	0	0	1	0	0.0000
eyeh-varpipe	SNP	*	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	*	segdupwithalt	homalt	0.0000	0.0000	100.0000	99.9987	0	0	1	0	0
eyeh-varpipe	SNP	*	tech_badpromoters	*	83.8356	100.0000	72.1698	67.3846	157	0	153	59	0	0.0000
eyeh-varpipe	SNP	*	tech_badpromoters	het	72.0379	100.0000	56.2963	72.9459	77	0	76	59	0	0.0000
eyeh-varpipe	SNP	*	tech_badpromoters	hetalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	48.6667	80	0	77	0	0
eyeh-varpipe	SNP	ti	*	*	99.7598	99.9651	99.5553	19.0734	2084791	727	2061083	9206	307	3.3348
eyeh-varpipe	SNP	ti	*	het	99.6284	99.9615	99.2976	20.5443	1281404	493	1264336	8944	171	1.9119
eyeh-varpipe	SNP	ti	*	hetalt	99.5363	99.8282	99.2460	38.4448	581	1	6450	49	47	95.9184
eyeh-varpipe	SNP	ti	*	homalt	99.9720	99.9710	99.9731	16.3629	802806	233	790297	213	89	41.7840
eyeh-varpipe	SNP	ti	HG002complexvar	*	99.8888	99.9038	99.8738	17.3355	507948	489	484239	612	191	31.2092
eyeh-varpipe	SNP	ti	HG002complexvar	het	99.8630	99.8948	99.8311	17.2379	314435	331	297366	503	109	21.6700
eyeh-varpipe	SNP	ti	HG002complexvar	hetalt	99.6433	99.5169	99.7701	22.0458	206	1	6075	14	13	92.8571
eyeh-varpipe	SNP	ti	HG002complexvar	homalt	99.9332	99.9188	99.9475	17.3280	193307	157	180798	95	69	72.6316
eyeh-varpipe	SNP	ti	HG002compoundhet	*	97.7572	99.1589	96.3946	39.7398	17331	147	12860	481	101	20.9979
eyeh-varpipe	SNP	ti	HG002compoundhet	het	95.2908	98.8427	91.9853	54.7039	9395	110	4017	350	50	14.2857
eyeh-varpipe	SNP	ti	HG002compoundhet	hetalt	99.8980	99.8273	99.9687	18.5958	578	1	6398	2	1	50.0000
eyeh-varpipe	SNP	ti	HG002compoundhet	homalt	97.1981	99.5131	94.9883	44.4780	7358	36	2445	129	50	38.7597
eyeh-varpipe	SNP	ti	decoy	*	0.0000	0.0000	100.0000	99.9935	0	0	5	0	0
eyeh-varpipe	SNP	ti	decoy	het	0.0000	0.0000	100.0000	99.9962	0	0	2	0	0
eyeh-varpipe	SNP	ti	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	decoy	homalt	0.0000	0.0000	100.0000	99.9871	0	0	3	0	0
eyeh-varpipe	SNP	ti	func_cds	*	99.2850	99.9637	98.6154	24.7463	13782	5	13675	192	1	0.5208
eyeh-varpipe	SNP	ti	func_cds	het	98.8564	99.9647	97.7724	26.7528	8501	3	8427	192	1	0.5208
eyeh-varpipe	SNP	ti	func_cds	hetalt	100.0000	100.0000	100.0000	57.6923	8	0	33	0	0
eyeh-varpipe	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.7688	5273	2	5215	0	0
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.9250	98.8608	89.4585	75.5441	3211	37	3106	366	29	7.9235
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.4797	98.7648	86.9467	79.4810	1999	25	1925	289	9	3.1142
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	81.2500	93.8697	0	0	13	3	2	66.6667
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.4666	99.0196	94.0419	60.5213	1212	12	1168	74	18	24.3243
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.8170	99.3884	96.2946	56.5927	27788	171	27079	1042	134	12.8599
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.1889	99.5294	94.9560	60.6805	17767	84	17150	911	86	9.4402
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	99.0228	100.0000	98.0645	81.3926	6	0	152	3	2	66.6667
eyeh-varpipe	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.9228	99.1388	98.7077	45.0241	10015	87	9777	128	46	35.9375
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	95.2637	99.3096	91.5345	77.9592	30928	215	29962	2771	142	5.1245
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	93.2309	99.3718	87.8049	80.7052	19456	123	18720	2600	87	3.3462
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	98.2206	100.0000	96.5035	90.6168	12	0	138	5	4	80.0000
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.8642	99.2036	98.5271	69.1157	11460	92	11104	166	51	30.7229
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	96.6942	99.6620	93.8981	67.0587	2949	10	2893	188	6	3.1915
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	95.0884	99.7815	90.8168	71.4761	1827	4	1790	181	4	2.2099
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	100.0000	91.2088	0	0	8	0	0
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.4164	99.4681	99.3648	53.1463	1122	6	1095	7	2	28.5714
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0

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