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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
31751-31800 / 86044 show all
eyeh-varpipeINDELI16_PLUSsegduphetalt
40.0000
25.0000
100.0000
94.7368
13100
eyeh-varpipeINDELI16_PLUSsegduphomalt
81.2500
68.4211
100.0000
81.1594
1361300
eyeh-varpipeINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUStech_badpromoters*
57.1429
50.0000
66.6667
40.0000
22211
100.0000
eyeh-varpipeINDELI16_PLUStech_badpromotershet
50.0000
50.0000
50.0000
33.3333
11111
100.0000
eyeh-varpipeINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUStech_badpromotershomalt
66.6667
50.0000
100.0000
0.0000
11100
eyeh-varpipeINDELI1_5**
94.9923
93.5665
96.4622
53.4954
140971969314110351754944
95.5362
eyeh-varpipeINDELI1_5*het
97.6534
97.4342
97.8735
52.4121
7701320287690916711507
90.1855
eyeh-varpipeINDELI1_5*hetalt
60.5783
43.9661
97.3679
73.2444
492262735216141132
93.6170
eyeh-varpipeINDELI1_5*homalt
96.1261
97.6964
94.6055
51.8219
5903613925897833633305
98.2753
eyeh-varpipeINDELI1_5HG002complexvar*
95.9629
94.9405
97.0075
49.9241
31675168831023957917
95.8203
eyeh-varpipeINDELI1_5HG002complexvarhet
97.2764
97.2566
97.2962
48.7706
1769049917129476444
93.2773
eyeh-varpipeINDELI1_5HG002complexvarhetalt
71.6240
56.8366
96.8118
75.7679
98174512454139
95.1220
eyeh-varpipeINDELI1_5HG002complexvarhomalt
96.6684
96.6984
96.6384
45.8931
1300444412649440434
98.6364
eyeh-varpipeINDELI1_5HG002compoundhet*
54.5656
48.0495
63.1261
63.8199
59376419596134823440
98.7938
eyeh-varpipeINDELI1_5HG002compoundhethet
74.0633
83.6471
66.4499
67.5390
711139511258225
87.2093
eyeh-varpipeINDELI1_5HG002compoundhethetalt
60.8513
43.9832
98.7067
61.4827
4916626151906865
95.5882
eyeh-varpipeINDELI1_5HG002compoundhethomalt
14.0848
94.2249
7.6112
66.1111
3101926031563150
99.8099
eyeh-varpipeINDELI1_5decoy*
0.0000
0.0000
95.0000
99.6164
001910
0.0000
eyeh-varpipeINDELI1_5decoyhet
0.0000
0.0000
91.6667
99.6050
001110
0.0000
eyeh-varpipeINDELI1_5decoyhetalt
0.0000
0.0000
100.0000
99.6212
00100
eyeh-varpipeINDELI1_5decoyhomalt
0.0000
0.0000
100.0000
99.6339
00700
eyeh-varpipeINDELI1_5func_cds*
98.6417
98.8889
98.3957
28.6260
178218432
66.6667
eyeh-varpipeINDELI1_5func_cdshet
97.4503
98.3051
96.6102
34.4444
5815721
50.0000
eyeh-varpipeINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
62.5000
20300
eyeh-varpipeINDELI1_5func_cdshomalt
99.1798
99.1597
99.2000
23.7805
118112411
100.0000
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
59.1529
51.0315
70.3486
60.3619
9409021433604512
84.7682
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
85.8715
81.4199
90.8380
65.8788
5391238138243
52.4390
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
27.1199
15.9420
90.7489
71.4824
1437542062119
90.4762
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
60.4770
91.1661
45.2459
46.8023
25825414501450
89.8204
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
86.7925
100.0000
76.6667
97.8198
102375
71.4286
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
98.4010
001300
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3636
10200
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
53.3333
97.0472
00875
71.4286
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
83.1973
74.7833
93.7446
68.3849
1164939286175841214009
97.2822
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
95.7997
94.0020
97.6675
65.5892
573636636639875794
90.7429
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
61.4597
44.8804
97.4636
72.8689
266532734957129121
93.7984
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
89.1434
91.8292
86.6102
71.1229
32482892016231173094
99.2621
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
77.4599
71.6987
84.2278
56.4520
1152745502131339913815
95.5901
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
92.9543
91.5421
94.4108
58.8410
587754311520682569
83.4311
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
53.7340
37.1777
96.8750
57.0119
21923704331710799
92.5234
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
77.4574
91.9436
66.9147
52.7787
3458303647632023147
98.2823
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
88.9527
87.7778
90.1596
65.0395
553776787457
77.0270
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
93.7316
95.9538
91.6100
65.6542
332144043720
54.0541
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
62.5000
47.6190
90.9091
74.4186
40446066
100.0000
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
88.8955
90.5000
87.3469
59.7701
181192143131
100.0000