PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
31001-31050 / 86044 show all | |||||||||||||||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | * | 36.8670 | 24.7423 | 72.2944 | 43.7956 | 96 | 292 | 334 | 128 | 127 | 99.2188 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | het | 45.8194 | 33.3333 | 73.2620 | 48.9071 | 56 | 112 | 137 | 50 | 50 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | hetalt | 19.3536 | 10.8571 | 89.0110 | 49.7238 | 19 | 156 | 81 | 10 | 10 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 53.6328 | 46.6667 | 63.0435 | 33.0909 | 21 | 24 | 116 | 68 | 67 | 98.5294 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | * | 0.0000 | 0.0000 | 25.0000 | 69.2308 | 0 | 26 | 2 | 6 | 5 | 83.3333 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | het | 0.0000 | 0.0000 | 90.0000 | 0 | 3 | 0 | 1 | 1 | 100.0000 | ||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 0.0000 | 0.0000 | 100.0000 | 81.8182 | 0 | 23 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 5 | 4 | 80.0000 | ||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | * | 42.3430 | 32.4324 | 60.9756 | 37.4046 | 12 | 25 | 50 | 32 | 32 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | het | 34.8624 | 25.0000 | 57.5758 | 41.0714 | 4 | 12 | 19 | 14 | 14 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 14.2857 | 7.6923 | 100.0000 | 45.8333 | 1 | 12 | 13 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 63.6364 | 87.5000 | 50.0000 | 29.4118 | 7 | 1 | 18 | 18 | 18 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m0_e0 | * | 51.3761 | 36.3636 | 87.5000 | 70.3704 | 4 | 7 | 7 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m0_e0 | het | 54.5455 | 37.5000 | 100.0000 | 64.2857 | 3 | 5 | 5 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 57.1429 | 50.0000 | 66.6667 | 76.9231 | 1 | 1 | 2 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m1_e0 | * | 35.9447 | 23.0769 | 81.2500 | 69.2308 | 6 | 20 | 13 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m1_e0 | het | 34.9515 | 22.2222 | 81.8182 | 64.5161 | 4 | 14 | 9 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 3 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 53.3333 | 40.0000 | 80.0000 | 75.0000 | 2 | 3 | 4 | 1 | 1 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m2_e0 | * | 35.9447 | 23.0769 | 81.2500 | 72.8814 | 6 | 20 | 13 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m2_e0 | het | 34.9515 | 22.2222 | 81.8182 | 68.5714 | 4 | 14 | 9 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 3 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | * | 0.0000 | 0.0000 | 60.9375 | 95.0788 | 0 | 0 | 78 | 50 | 35 | 70.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | het | 0.0000 | 0.0000 | 82.6087 | 96.5465 | 0 | 0 | 19 | 4 | 3 | 75.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 80.3922 | 94.9153 | 0 | 0 | 41 | 10 | 8 | 80.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 33.3333 | 94.2060 | 0 | 0 | 18 | 36 | 24 | 66.6667 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | * | 0.0000 | 0.0000 | 73.1183 | 95.8464 | 0 | 0 | 68 | 25 | 21 | 84.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | het | 0.0000 | 0.0000 | 89.4737 | 96.8543 | 0 | 0 | 17 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 81.3953 | 95.1412 | 0 | 0 | 35 | 8 | 7 | 87.5000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 51.6129 | 95.8667 | 0 | 0 | 16 | 15 | 12 | 80.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | * | 0.0000 | 0.0000 | 62.7586 | 94.9565 | 0 | 0 | 91 | 54 | 38 | 70.3704 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | het | 0.0000 | 0.0000 | 82.1429 | 96.4780 | 0 | 0 | 23 | 5 | 4 | 80.0000 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 80.0000 | 94.8454 | 0 | 0 | 44 | 11 | 9 | 81.8182 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | homalt | 0.0000 | 0.0000 | 38.7097 | 93.8796 | 0 | 0 | 24 | 38 | 25 | 65.7895 | |