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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
30701-30750 / 86044 show all
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
31.7845
22.0149
57.1429
50.2269
118418188141135
95.7447
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
60.0475
46.9799
83.1858
54.4355
7079941919
100.0000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
17.0474
9.3664
94.7368
65.0307
343295433
100.0000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
35.1538
58.3333
25.1572
36.4000
141040119113
94.9580
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
45.8081
34.5074
68.1144
30.9514
12052287454821292118
99.4833
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
71.6109
63.4771
82.1356
31.7350
4712712023440436
99.0909
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
37.1380
22.9618
97.0630
40.4691
583195613554141
100.0000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
52.5500
71.5640
41.5188
24.1862
15160117016481641
99.5752
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
47.7195
36.5649
68.6675
29.6562
10901891437019941989
99.7492
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
73.7796
66.9983
82.0883
30.1926
4041991934422418
99.0521
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
39.8487
25.0685
97.0961
38.8155
549164113043939
100.0000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
53.6696
72.8723
42.4765
23.3535
13751113215331532
99.9348
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
48.9376
37.8496
69.2135
34.1472
14752422492821922178
99.3613
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
73.5605
66.5605
82.2059
36.1952
6273152236484477
98.5537
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
37.9488
23.6006
96.7984
42.1136
624202014214747
100.0000
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
54.1237
72.0257
43.3492
26.9375
22487127116611654
99.5786
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
55.8126
45.6817
71.7174
42.4460
28883434659826022576
99.0008
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
75.7026
69.8630
82.6075
47.3461
13775943073647636
98.2998
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
40.3639
25.5814
95.6173
48.0711
902262417898281
98.7805
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
58.2480
73.8182
48.1020
32.1234
609216173618731859
99.2525
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
51.3203
40.1741
71.0262
37.0164
9691443474119341923
99.4312
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
78.9597
78.8934
79.0261
42.0187
3851032061547541
98.9031
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
42.9905
27.6680
96.3481
42.7526
490128115836060
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
52.1197
61.4379
45.2558
24.9536
9459109713271322
99.6232
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
15.0000
57.4468
09231717
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
88.2353
09022
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
083000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
16.6667
30.7692
0031515
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
75.4767
66.4516
87.3385
73.7805
103523384946
93.8776
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
85.4239
80.6452
90.8046
75.2137
50121581616
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
40.0000
25.0000
100.0000
79.5455
11333600
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
83.4783
85.7143
81.3559
70.4013
4271443330
90.9091
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
66.6667
98.7791
021477
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
75.0000
98.7441
00622
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
97.2973
02500
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
37.5000
99.1091
00355
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
63.9710
53.3687
79.8301
38.1774
7056162632665660
99.2481
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
79.6904
73.7069
86.7312
40.6237
3421221255192190
98.9583
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
48.0410
32.1373
95.1060
47.1096
2064355833030
100.0000
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
68.1726
72.6852
64.1876
28.7853
15759794443440
99.3228
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
18.4985
11.8280
42.4242
51.4706
22164709584
88.4211
eyeh-varpipeINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
50.3311
40.0000
67.8571
62.1622
1421381817
94.4444