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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
29201-29250 / 86044 show all
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
97.7778
10100
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.1429
10100
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaSNPtvmap_l100_m0_e0*
99.2887
98.8632
99.7179
67.1372
10958126109583114
45.1613
egarrison-hhgaSNPtvmap_l100_m0_e0het
99.0740
98.5184
99.6359
68.9508
711510771152610
38.4615
egarrison-hhgaSNPtvmap_l100_m0_e0hetalt
90.3226
87.5000
93.3333
81.0127
1421411
100.0000
egarrison-hhgaSNPtvmap_l100_m0_e0homalt
99.7265
99.5580
99.8956
63.0055
382917382943
75.0000
egarrison-hhgaSNPtvmap_l100_m1_e0*
99.4963
99.1715
99.8233
63.2033
24298203242984319
44.1860
egarrison-hhgaSNPtvmap_l100_m1_e0het
99.3126
98.8649
99.7644
63.7472
15242175152423613
36.1111
egarrison-hhgaSNPtvmap_l100_m1_e0hetalt
95.0000
92.6829
97.4359
77.5862
3833811
100.0000
egarrison-hhgaSNPtvmap_l100_m1_e0homalt
99.8284
99.7235
99.9335
62.1365
901825901865
83.3333
egarrison-hhgaSNPtvmap_l100_m2_e0*
99.4951
99.1851
99.8071
65.1309
24829204248294819
39.5833
egarrison-hhgaSNPtvmap_l100_m2_e0het
99.3093
98.8845
99.7379
65.3478
15601176156014113
31.7073
egarrison-hhgaSNPtvmap_l100_m2_e0hetalt
95.1220
92.8571
97.5000
79.6954
3933911
100.0000
egarrison-hhgaSNPtvmap_l100_m2_e0homalt
99.8316
99.7287
99.9347
64.6441
918925918965
83.3333
egarrison-hhgaSNPtvmap_l100_m2_e1*
99.4981
99.1892
99.8090
65.1604
25078205250784819
39.5833
egarrison-hhgaSNPtvmap_l100_m2_e1het
99.3132
98.8894
99.7405
65.3943
15761177157614113
31.7073
egarrison-hhgaSNPtvmap_l100_m2_e1hetalt
95.2381
93.0233
97.5610
79.3970
4034011
100.0000
egarrison-hhgaSNPtvmap_l100_m2_e1homalt
99.8332
99.7312
99.9354
64.6456
927725927765
83.3333
egarrison-hhgaSNPtvmap_l125_m0_e0*
99.1050
98.5221
99.6948
73.4104
6533986533209
45.0000
egarrison-hhgaSNPtvmap_l125_m0_e0het
98.8440
98.1141
99.5849
74.9393
4318834318187
38.8889
egarrison-hhgaSNPtvmap_l125_m0_e0hetalt
87.5000
77.7778
100.0000
88.1356
72700
egarrison-hhgaSNPtvmap_l125_m0_e0homalt
99.6615
99.4147
99.9095
69.6595
220813220822
100.0000
egarrison-hhgaSNPtvmap_l125_m1_e0*
99.3983
99.0135
99.7861
68.1855
15858158158583417
50.0000
egarrison-hhgaSNPtvmap_l125_m1_e0het
99.1809
98.6569
99.7105
68.8561
999013699902912
41.3793
egarrison-hhgaSNPtvmap_l125_m1_e0hetalt
96.5517
93.3333
100.0000
78.2946
2822800
egarrison-hhgaSNPtvmap_l125_m1_e0homalt
99.7864
99.6587
99.9145
66.8895
584020584055
100.0000
egarrison-hhgaSNPtvmap_l125_m2_e0*
99.4065
99.0357
99.7800
70.1050
16330159163303617
47.2222
egarrison-hhgaSNPtvmap_l125_m2_e0het
99.1915
98.6880
99.7001
70.3958
10305137103053112
38.7097
egarrison-hhgaSNPtvmap_l125_m2_e0hetalt
96.5517
93.3333
100.0000
81.3333
2822800
egarrison-hhgaSNPtvmap_l125_m2_e0homalt
99.7920
99.6676
99.9167
69.5036
599720599755
100.0000
egarrison-hhgaSNPtvmap_l125_m2_e1*
99.4064
99.0334
99.7822
70.1626
16496161164963617
47.2222
egarrison-hhgaSNPtvmap_l125_m2_e1het
99.1904
98.6828
99.7032
70.4601
10414139104143112
38.7097
egarrison-hhgaSNPtvmap_l125_m2_e1hetalt
96.5517
93.3333
100.0000
81.4570
2822800
egarrison-hhgaSNPtvmap_l125_m2_e1homalt
99.7940
99.6707
99.9175
69.5482
605420605455
100.0000
egarrison-hhgaSNPtvmap_l150_m0_e0*
98.9629
98.2990
99.6357
78.3979
4103714103156
40.0000
egarrison-hhgaSNPtvmap_l150_m0_e0het
98.6520
97.8192
99.4991
79.4500
2781622781145
35.7143
egarrison-hhgaSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
93.8776
30300
egarrison-hhgaSNPtvmap_l150_m0_e0homalt
99.6224
99.3223
99.9242
75.6143
13199131911
100.0000
egarrison-hhgaSNPtvmap_l150_m1_e0*
99.2818
98.8087
99.7594
72.5943
10782130107822612
46.1538
egarrison-hhgaSNPtvmap_l150_m1_e0het
99.0220
98.3876
99.6646
73.3388
68341126834239
39.1304
egarrison-hhgaSNPtvmap_l150_m1_e0hetalt
94.7368
90.0000
100.0000
82.0000
1821800
egarrison-hhgaSNPtvmap_l150_m1_e0homalt
99.7589
99.5945
99.9237
71.1191
393016393033
100.0000
egarrison-hhgaSNPtvmap_l150_m2_e0*
99.2922
98.8287
99.7600
74.2574
11222133112222712
44.4444
egarrison-hhgaSNPtvmap_l150_m2_e0het
99.0356
98.4142
99.6649
74.5802
71371157137249
37.5000