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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 484 485 486 487 488 489 490 491 492 ... 1720 1721 » 24351-24400 / 86044 show all
ckim-vqsr	INDEL	D1_5	map_l250_m1_e0	*	92.0000	94.1520	89.9441	96.9501	161	10	161	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m1_e0	het	89.2704	93.6937	85.2459	97.3920	104	7	104	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m1_e0	hetalt	50.0000	33.3333	100.0000	99.2647	1	2	1	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m1_e0	homalt	99.1150	98.2456	100.0000	94.6919	56	1	56	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m2_e0	*	92.5532	94.5652	90.6250	97.1080	174	10	174	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m2_e0	het	90.1186	94.2149	86.3636	97.4995	114	7	114	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m2_e0	hetalt	50.0000	33.3333	100.0000	99.3902	1	2	1	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	95.0669	59	1	59	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m2_e1	*	92.5926	94.5946	90.6736	97.1634	175	10	175	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m2_e1	het	90.1961	94.2623	86.4662	97.5411	115	7	115	18	1	5.5556
ckim-vqsr	INDEL	D1_5	map_l250_m2_e1	hetalt	50.0000	33.3333	100.0000	99.4048	1	2	1	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	95.1915	59	1	59	0	0
ckim-vqsr	INDEL	D1_5	map_siren	*	98.3083	97.9031	98.7169	84.9543	3455	74	3462	45	6	13.3333
ckim-vqsr	INDEL	D1_5	map_siren	het	97.8636	97.4967	98.2332	85.9953	2220	57	2224	40	2	5.0000
ckim-vqsr	INDEL	D1_5	map_siren	hetalt	93.6709	88.0952	100.0000	91.2218	74	10	74	0	0
ckim-vqsr	INDEL	D1_5	map_siren	homalt	99.4864	99.4007	99.5723	81.4444	1161	7	1164	5	4	80.0000
ckim-vqsr	INDEL	D1_5	segdup	*	99.1399	99.1840	99.0958	96.1257	1094	9	1096	10	2	20.0000
ckim-vqsr	INDEL	D1_5	segdup	het	98.9178	98.9884	98.8473	96.6564	685	7	686	8	0	0.0000
ckim-vqsr	INDEL	D1_5	segdup	hetalt	98.0392	96.1538	100.0000	95.6336	50	2	51	0	0
ckim-vqsr	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-vqsr	INDEL	D1_5	segdupwithalt	*	100.0000	100.0000	100.0000	99.9960	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	het	100.0000	100.0000	100.0000	99.9946	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	*	97.2973	94.7368	100.0000	48.5714	18	1	18	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	het	93.3333	87.5000	100.0000	58.8235	7	1	7	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
ckim-vqsr	INDEL	D6_15	*	*	98.2389	97.9189	98.5610	55.8987	25549	543	25548	373	340	91.1528
ckim-vqsr	INDEL	D6_15	*	het	98.8252	99.3703	98.2861	64.1967	11519	73	11469	200	170	85.0000
ckim-vqsr	INDEL	D6_15	*	hetalt	96.8555	94.3479	99.5000	32.9551	7712	462	7761	39	39	100.0000
ckim-vqsr	INDEL	D6_15	*	homalt	98.8887	99.8735	97.9231	55.6564	6318	8	6318	134	131	97.7612
ckim-vqsr	INDEL	D6_15	HG002complexvar	*	98.0282	97.5292	98.5322	58.5722	5171	131	5169	77	70	90.9091
ckim-vqsr	INDEL	D6_15	HG002complexvar	het	98.8682	98.6538	99.0835	59.5418	3078	42	3027	28	22	78.5714
ckim-vqsr	INDEL	D6_15	HG002complexvar	hetalt	93.7593	91.3129	96.3403	47.3985	925	88	974	37	37	100.0000
ckim-vqsr	INDEL	D6_15	HG002complexvar	homalt	99.4466	99.9145	98.9831	63.0094	1168	1	1168	12	11	91.6667
ckim-vqsr	INDEL	D6_15	HG002compoundhet	*	95.5291	94.7736	96.2967	36.1965	8559	472	8555	329	326	99.0881
ckim-vqsr	INDEL	D6_15	HG002compoundhet	het	89.9917	98.0140	83.1832	68.8202	839	17	831	168	166	98.8095
ckim-vqsr	INDEL	D6_15	HG002compoundhet	hetalt	96.9271	94.4179	99.5733	24.1268	7696	455	7700	33	33	100.0000
ckim-vqsr	INDEL	D6_15	HG002compoundhet	homalt	27.2727	100.0000	15.7895	71.2121	24	0	24	128	127	99.2188
ckim-vqsr	INDEL	D6_15	decoy	*	100.0000	100.0000	100.0000	99.9554	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	decoy	hetalt	100.0000	100.0000	100.0000	99.2647	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	56.5657	43	0	43	0	0
ckim-vqsr	INDEL	D6_15	func_cds	het	100.0000	100.0000	100.0000	53.9683	29	0	29	0	0
ckim-vqsr	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	61.2903	12	0	12	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.7823	92.5681	95.0288	54.7425	3637	292	3632	190	179	94.2105
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.1494	96.8783	89.6970	74.8348	931	30	888	102	92	90.1961

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