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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 472 473 474 475 476 477 478 479 480 ... 1720 1721 » 23751-23800 / 86044 show all
ckim-vqsr	INDEL	D1_5	HG002complexvar	het	99.6767	99.4799	99.8743	56.3731	20657	108	20661	26	12	46.1538
ckim-vqsr	INDEL	D1_5	HG002complexvar	hetalt	92.5788	88.8314	96.6563	72.4212	1201	151	1243	43	43	100.0000
ckim-vqsr	INDEL	D1_5	HG002complexvar	homalt	99.8538	99.8585	99.8491	60.1802	10583	15	10590	16	14	87.5000
ckim-vqsr	INDEL	D1_5	HG002compoundhet	*	95.9661	94.4994	97.4791	66.2791	11562	673	11562	299	296	98.9967
ckim-vqsr	INDEL	D1_5	HG002compoundhet	het	96.1223	98.2639	94.0720	78.9357	1698	30	1698	107	105	98.1308
ckim-vqsr	INDEL	D1_5	HG002compoundhet	hetalt	96.5656	93.7157	99.5943	58.2787	9574	642	9574	39	39	100.0000
ckim-vqsr	INDEL	D1_5	HG002compoundhet	homalt	79.0191	99.6564	65.4628	87.5701	290	1	290	153	152	99.3464
ckim-vqsr	INDEL	D1_5	decoy	*	100.0000	100.0000	100.0000	99.9751	4	0	4	0	0
ckim-vqsr	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9857	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	decoy	hetalt	100.0000	100.0000	100.0000	99.6933	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	decoy	homalt	100.0000	100.0000	100.0000	99.9405	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	func_cds	*	99.6885	100.0000	99.3789	53.3333	159	0	160	1	0	0.0000
ckim-vqsr	INDEL	D1_5	func_cds	het	99.4220	100.0000	98.8506	62.8205	85	0	86	1	0	0.0000
ckim-vqsr	INDEL	D1_5	func_cds	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	func_cds	homalt	100.0000	100.0000	100.0000	32.7273	74	0	74	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	95.0829	93.1978	97.0458	62.0799	3713	271	3712	113	105	92.9204
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.7729	96.8794	96.6667	75.3175	1366	44	1334	46	39	84.7826
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.3918	87.9802	99.5128	30.5121	1603	219	1634	8	8	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.6913	98.9362	92.6526	62.3535	744	8	744	59	58	98.3051
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.9141	11	0	11	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.7897	8	0	8	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.7742	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3769	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.2755	98.9912	99.5615	74.4850	63781	650	63794	281	255	90.7473
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5967	99.5697	99.6236	75.3470	33093	143	33087	125	100	80.0000
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.1068	94.7612	99.5714	64.0076	8809	487	8828	38	38	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6856	99.9087	99.4636	76.0319	21879	20	21879	118	117	99.1525
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.3646	97.7617	98.9750	61.5381	30705	703	30705	318	294	92.4528
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0685	99.1132	99.0238	69.1438	13635	122	13593	134	112	83.5821
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.6665	93.9188	99.5798	30.8815	8726	565	8768	37	37	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.0327	99.8086	98.2688	63.7648	8344	16	8344	147	145	98.6395
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.9511	97.2441	98.6684	67.2767	741	21	741	10	7	70.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.6239	98.8506	98.3982	70.2519	430	5	430	7	4	57.1429
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	89.6000	81.1594	100.0000	52.5424	56	13	56	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8372	98.8372	98.8372	63.5593	255	3	255	3	3	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.9648	10	0	10	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.8854	7	0	7	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.1538	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3590	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.5135	99.4812	99.5457	78.2406	1534	8	1534	7	5	71.4286
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.7296	100.0000	99.4606	78.2343	922	0	922	5	3	60.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	95.1049	91.8919	98.5507	79.7654	68	6	68	1	1	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7250	99.6337	99.8165	78.0419	544	2	544	1	1	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.8588	99.8119	99.9058	81.3717	1061	2	1061	1	1	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	80.5621	657	0	657	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	95.8904	94.5946	97.2222	86.4151	35	2	35	1	1	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	82.0525	369	0	369	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	94.3452	92.0365	96.7728	58.9950	2219	192	2219	74	70	94.5946
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	96.2746	95.6815	96.8750	75.2809	709	32	682	22	19	86.3636
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.3378	87.8389	99.5712	29.6743	1134	157	1161	5	5	100.0000

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