PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
20951-21000 / 86044 show all
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELD1_5map_l150_m2_e1homalt
70.6494
54.8387
99.2701
83.9013
13611213611
100.0000
ckim-isaacINDELD1_5map_l250_m0_e0*
71.2329
56.5217
96.2963
98.0519
26202611
100.0000
ckim-isaacINDELD1_5map_l250_m0_e0het
78.5714
66.6667
95.6522
98.0833
22112211
100.0000
ckim-isaacINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacINDELD1_5map_l250_m0_e0homalt
47.0588
30.7692
100.0000
97.2028
49400
ckim-isaacINDELD1_5map_l250_m1_e0*
64.8438
48.5380
97.6471
96.7779
83888322
100.0000
ckim-isaacINDELD1_5map_l250_m1_e0het
70.1405
54.9550
96.9231
97.0865
61506322
100.0000
ckim-isaacINDELD1_5map_l250_m1_e0hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5map_l250_m1_e0homalt
51.9481
35.0877
100.0000
93.7695
20372000
ckim-isaacINDELD1_5map_l250_m2_e0*
65.2174
48.9130
97.8261
96.9405
90949022
100.0000
ckim-isaacINDELD1_5map_l250_m2_e0het
69.8630
54.5455
97.1429
97.2167
66556822
100.0000
ckim-isaacINDELD1_5map_l250_m2_e0hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5map_l250_m2_e0homalt
53.6585
36.6667
100.0000
94.3005
22382200
ckim-isaacINDELD1_5map_l250_m2_e1*
64.9819
48.6486
97.8261
97.0101
90959022
100.0000
ckim-isaacINDELD1_5map_l250_m2_e1het
69.4952
54.0984
97.1429
97.2741
66566822
100.0000
ckim-isaacINDELD1_5map_l250_m2_e1hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5map_l250_m2_e1homalt
53.6585
36.6667
100.0000
94.4584
22382200
ckim-isaacINDELD1_5map_siren*
88.4097
80.1927
98.5028
77.5975
283069928294319
44.1860
ckim-isaacINDELD1_5map_sirenhet
90.2008
83.4870
98.0888
79.1671
190137618993714
37.8378
ckim-isaacINDELD1_5map_sirenhetalt
78.6581
67.8571
93.5484
87.0293
57275844
100.0000
ckim-isaacINDELD1_5map_sirenhomalt
85.4065
74.6575
99.7712
71.3349
87229687221
50.0000
ckim-isaacINDELD1_5segdup*
98.5851
97.9148
99.2647
92.9825
108023108083
37.5000
ckim-isaacINDELD1_5segduphet
98.8393
98.5549
99.1254
93.5804
6821068062
33.3333
ckim-isaacINDELD1_5segduphetalt
96.1154
94.2308
98.0769
93.2026
4935111
100.0000
ckim-isaacINDELD1_5segduphomalt
98.4485
97.2145
99.7143
91.3644
3491034910
0.0000
ckim-isaacINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9921
10100
ckim-isaacINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9889
10100
ckim-isaacINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
ckim-isaacINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000