PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10051-10100 / 86044 show all
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
98.3271
00900
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
80.4196
96.5011
00115282
7.1429
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
77.8689
96.2531
0095271
3.7037
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
95.2381
97.4729
002011
100.0000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
84.9624
96.2875
01226403
7.5000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
82.0276
96.1532
01178392
5.1282
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
97.9592
96.7848
004811
100.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
84.7368
95.3466
00161292
6.8966
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
80.6667
95.5264
00121292
6.8966
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
100.0000
94.5205
004000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
97.4684
00020
0.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
97.0149
00020
0.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10*
98.8610
100.0000
97.7477
93.4222
1021752
40.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10het
98.3498
100.0000
96.7532
93.7525
1014952
40.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
100.0000
92.5275
006800
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
100.0000
99.9057
00600
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
99.8948
00500
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
100.0000
99.9380
00100
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
94.1176
93.9286
016440
0.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
92.4528
93.7204
014940
0.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
94.5652
001500
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
45.4545
90.4348
00561
16.6667
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
45.4545
89.5238
00561
16.6667
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50*
94.5455
100.0000
89.6552
92.7861
102631
33.3333
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50het
92.3077
100.0000
85.7143
93.1596
101831
33.3333
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
100.0000
91.5789
00800
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
50.0000
83.3333
00111
100.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
50.0000
81.8182
00111
100.0000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
cchapple-customINDELC1_5map_l100_m0_e0*
0.0000
0.0000
57.1429
94.9091
0016125
41.6667
cchapple-customINDELC1_5map_l100_m0_e0het
0.0000
0.0000
45.4545
94.8598
0010125
41.6667
cchapple-customINDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5map_l100_m0_e0homalt
0.0000
0.0000
100.0000
95.0820
00600
cchapple-customINDELC1_5map_l100_m1_e0*
0.0000
0.0000
67.9245
95.0188
0036178
47.0588