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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10001-10050 / 86044 show all
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
98.1835
98.9169
97.4610
70.8771
1762619317235449399
88.8641
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.1489
92.9019
99.6311
33.4986
13036996132324948
97.9592
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.8021
99.7736
95.9069
61.4948
114582611458489478
97.7505
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.9919
97.7475
98.2375
67.0385
6387914726365211421030
90.1926
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.5824
98.9009
98.2659
73.3042
3014533529694524432
82.4427
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.4536
93.4690
99.6351
39.9267
156141091158385857
98.2759
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.3553
99.7468
97.0021
67.1820
181204618120560541
96.6071
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_11to50*
98.2571
98.0815
98.4334
52.3164
3589070235814570538
94.3860
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_11to50het
98.8361
99.3147
98.3621
62.3698
1565210815494258231
89.5349
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
96.9298
94.4344
99.5608
32.7290
989258399744444
100.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
98.6696
99.8938
97.4750
45.7112
103461110346268263
98.1343
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_51to200*
83.2354
82.2465
84.2483
57.4547
17283731642307301
98.0456
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_51to200het
76.6399
92.0408
65.6542
80.0373
45139281147142
96.5986
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_51to200hetalt
84.8193
73.8019
99.7033
31.3646
924328100833
100.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_diTR_51to200homalt
81.2428
98.3287
69.2157
47.0954
3536353157156
99.3631
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_6to10*
99.8531
99.8195
99.8867
58.0732
2820951282123220
62.5000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_6to10het
99.8660
99.8235
99.9086
58.4519
164002916399154
26.6667
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.0116
96.6355
99.4275
73.3333
5171852133
100.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9204
99.9646
99.8762
56.3374
112924112921413
92.8571
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
95.4968
94.3548
96.6667
99.9192
117711640
0.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
93.5396
91.9540
95.1807
99.8945
8077940
0.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.8731
1601600
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.9633
2102100
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
99.4660
99.4311
99.5010
59.2336
19749113197429960
60.6061
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
99.5180
99.5769
99.4593
62.5780
1106147110366022
36.6667
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7006
97.6510
99.7730
41.9121
261963263766
100.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7043
99.9506
99.4592
57.8271
6069360693332
96.9697
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_51to200*
97.2141
96.6855
97.7484
68.9339
25678825185846
79.3103
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_51to200het
96.7299
97.1074
96.3554
83.0174
940288463222
68.7500
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.1522
95.1464
99.2443
33.7229
113758118298
88.8889
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_51to200homalt
98.0981
99.5935
96.6469
61.7358
49024901716
94.1176
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_triTR_11to50*
99.7548
99.6881
99.8216
48.8361
6712216714128
66.6667
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
60.0000
93.5345
00961
16.6667
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
97.2973
00011
100.0000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
74.7664
96.5316
0080272
7.4074
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
73.1959
96.1416
0071261
3.8462
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
90.0000
98.2487
00911
100.0000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
78.2609
96.7537
0072200
0.0000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
75.9036
96.3850
0063200
0.0000
cchapple-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000