PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7251-7300 / 86044 show all
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9236
1001000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8391
70700
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3197
20200
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.2196
98.8975
99.5437
78.3395
152517152774
57.1429
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.1852
99.0239
99.3471
78.2176
913991363
50.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.8333
93.2432
98.5714
82.3678
6956911
100.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7245
99.4505
100.0000
77.8994
543354500
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.4810
99.1533
99.8108
81.4724
10549105521
50.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.4652
99.0868
99.8466
80.5547
651665110
0.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.8904
94.5946
97.2222
88.3871
3523511
100.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8643
99.7290
100.0000
81.9295
368136900
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.0557
90.2945
95.9912
59.3990
217723421799183
91.2088
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
95.0122
93.7922
96.2644
75.4150
695466702621
80.7692
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.0423
85.9024
99.1274
31.9073
11091821136108
80.0000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
92.4411
98.4169
87.1495
60.2600
37363735554
98.1818
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.0000
10100
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.1429
10100
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
97.2830
96.3585
98.2253
48.3467
1984675019870359319
88.8579
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
98.0691
97.8061
98.3336
59.4584
7222162719912298
80.3279
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.0004
93.1933
98.9817
26.3036
754455175827872
92.3077
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.1100
99.2769
96.9703
51.0036
5080375089159149
93.7107
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.8063
97.1411
98.4806
47.1994
1773752217759274239
87.2263
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
98.3586
98.2333
98.4842
57.4113
6561118656210180
79.2079
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.6973
94.5364
98.9593
25.4960
645437364666864
94.1176
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.5824
99.3478
97.8288
50.3389
472231473110595
90.4762
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.3791
96.4809
98.2942
54.2906
2146778321493373326
87.3995
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
98.1287
97.8680
98.3908
64.4221
82171798193134104
77.6119
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.9616
93.1237
98.9779
28.5807
761156276507973
92.4051
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.2431
99.2607
97.2461
57.3108
5639425650160149
93.1250
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.7710
96.8925
98.6656
61.3340
3043297630464412353
85.6796
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.3287
97.7902
98.8731
68.6335
1345330413424153111
72.5490
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.1607
93.4776
99.0024
33.2299
868560687338882
93.1818
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.5930
99.2105
97.9830
63.7025
8294668307171160
93.5673
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
98.1412
97.5428
98.7469
41.4519
2393760323956304264
86.8421
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
98.6463
98.4049
98.8889
50.5045
102411661023511588
76.5217
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.4617
94.1911
98.8445
26.3329
648640065017673
96.0526
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
98.9716
99.4894
98.4590
36.7681
7210377220113103
91.1504
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_51to200*
79.5312
73.0273
87.3070
53.3227
5091885097473
98.6486
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_51to200het
82.3970
81.4815
83.3333
78.7402
11025901817
94.4444
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
80.2738
67.8208
98.3287
28.7698
33315835366
100.0000
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
70.5882
92.9577
56.8966
51.0549
665665050
100.0000
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
99.5409
99.1719
99.9126
55.4663
25149210251562213
59.0909
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.3977
98.8829
99.9179
55.5579
1460516514609123
25.0000
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.9056
96.5937
99.2537
71.5700
3971439933
100.0000
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8131
99.6954
99.9311
54.3062
10147311014877
100.0000
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9969
10400
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
99.9954
00300