PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7101-7150 / 86044 show all
asubramanian-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
00040
0.0000
asubramanian-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
75.5000
000980
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
76.4158
0103040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
77.9412
0101950
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
66.6667
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
73.3333
0001040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
88.8889
00070
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
91.3043
00040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
82.3529
00030
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
95.7178
94.6429
96.8174
68.4294
583335781917
89.4737
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
96.5777
97.5610
95.6140
88.7352
160410954
80.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
95.0937
93.1429
97.1279
35.7383
326243721110
90.9091
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
96.0396
95.0980
97.0000
64.6643
9759733
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
97.1246
96.8153
97.4359
68.8623
152515240
0.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
93.2727
93.4426
93.1034
80.4054
5745440
0.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
99.0099
98.0392
100.0000
24.2857
5015300
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
66.6667
4504500
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
93.3333
91.3043
95.4545
67.8832
4244222
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
77.4194
75.0000
80.0000
92.1875
62411
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
95.8333
92.0000
100.0000
44.4444
2322500
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.2963
100.0000
92.8571
50.0000
1301311
100.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m0_e0*
80.0000
78.5714
81.4815
97.3188
2262250
0.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m0_e0het
78.3582
78.9474
77.7778
97.5577
1541440
0.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m0_e0hetalt
85.7143
75.0000
100.0000
92.5926
31400
asubramanian-gatkINDELD16_PLUSmap_l100_m0_e0homalt
80.0000
80.0000
80.0000
97.6852
41410
0.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m1_e0*
87.2093
86.2069
88.2353
95.4955
751275103
30.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m1_e0het
84.9211
86.9565
82.9787
96.4952
4063982
25.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m1_e0hetalt
87.5829
80.7692
95.6522
79.6460
2152211
100.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m1_e0homalt
93.3333
93.3333
93.3333
96.5358
1411410
0.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e0*
87.1508
86.6667
87.6404
95.9118
781278113
27.2727
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e0het
84.4646
87.5000
81.6327
96.8161
4264092
22.2222
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e0hetalt
87.6588
80.7692
95.8333
80.1653
2152311
100.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e0homalt
93.7500
93.7500
93.7500
96.9052
1511510
0.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e1*
87.5000
86.5979
88.4211
95.7342
841384113
27.2727
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e1het
85.3739
88.2353
82.6923
96.6984
4564392
22.2222
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e1hetalt
87.3950
80.0000
96.2963
79.2308
2462611
100.0000
asubramanian-gatkINDELD16_PLUSmap_l100_m2_e1homalt
93.7500
93.7500
93.7500
96.9349
1511510
0.0000
asubramanian-gatkINDELD16_PLUSmap_l125_m0_e0*
86.9565
83.3333
90.9091
97.9554
1021010
0.0000
asubramanian-gatkINDELD16_PLUSmap_l125_m0_e0het
88.8889
88.8889
88.8889
97.8417
81810
0.0000
asubramanian-gatkINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
01000
asubramanian-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.8947
20200