PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6701-6750 / 86044 show all
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
65.9420
000470
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
71.5924
0002230
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
73.0483
0001450
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
44.4444
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
69.3277
000730
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
76.4158
0103040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
77.9412
0101950
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
66.6667
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
73.3333
0001040
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
69.8046
0001700
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
70.7692
0001140
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
66.6667
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
67.6647
000540
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
66.6667
000120
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
80.0000
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
36.3636
00070
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
100.0000
0.0000
77.9141
100360
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
100.0000
0.0000
81.8182
100180
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
71.4286
000180
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
74.2690
010880
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
75.6410
010570
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
80.0000
00010
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
70.8738
000300
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
82.5581
000300
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
88.0000
000150
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
71.4286
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
67.5000
000130
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50*
0.0000
100.0000
0.0000
58.1818
100230
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50het
0.0000
100.0000
0.0000
56.6667
100130
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
60.0000
000100
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
60.0000
00060
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
77.7778
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
33.3333
00040
0.0000
asubramanian-gatkINDELC1_5map_l100_m0_e0*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0het
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0homalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m1_e0*
0.0000
0.0000
97.9592
00010
0.0000