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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6651-6700 / 86044 show all
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
94.9783
96.9173
93.1153
84.1668
12894110828071
88.7500
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.4167
92.9048
98.0682
36.5079
153211717263429
85.2941
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.8022
98.1618
97.4453
67.6027
10682010682824
85.7143
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.1487
95.7792
96.5210
75.6177
47882114772172130
75.5814
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
95.2696
96.9214
93.6732
86.2372
176356152510374
71.8447
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.6445
93.2160
98.2030
39.3698
180013120223731
83.7838
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
97.7654
98.0785
97.4543
75.1188
12252412253225
78.1250
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
97.1461
96.8750
97.4186
69.7659
17365617364639
84.7826
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
96.0917
97.5369
94.6886
84.1739
594155172925
86.2069
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
97.0756
95.4082
98.8024
34.2002
74836825109
90.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
98.5000
98.7469
98.2544
65.8723
394539475
71.4286
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
90.2544
90.2041
90.3047
58.2659
663726527064
91.4286
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
75.9608
97.6331
62.1622
84.2553
1654694241
97.6190
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
91.4871
85.8770
97.8814
35.2538
37762462108
80.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
90.9774
95.2756
87.0504
53.0405
12161211815
83.3333
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
97.7528
100.0000
95.6044
85.2033
8708740
0.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
96.9697
100.0000
94.1176
87.7990
5204830
0.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
56.7568
1201600
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
97.8723
100.0000
95.8333
85.0000
2302310
0.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
92.9134
86.7647
100.0000
97.2936
5995900
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
90.0000
81.8182
100.0000
97.4286
3683600
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
94.2029
81800
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.6636
1501500
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
98.1647
97.6017
98.7342
72.8055
93623936128
66.6667
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
98.4760
97.5062
99.4652
82.0365
3911037221
50.0000
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
97.4555
96.9512
97.9651
38.5714
3181033775
71.4286
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
98.6957
98.6957
98.6957
72.7488
227322732
66.6667
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
82.4074
000190
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
81.4286
000130
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
84.2105
00060
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
0.0000
76.5625
000150
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
0.0000
69.2308
000120
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
88.0000
00030
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
76.8240
000540
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
81.0651
000320
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
60.0000
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
66.1017
000200
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
0.0000
0.0000
67.1498
0002040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
68.4086
0001330
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
37.5000
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
65.6250
000660
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
64.5833
0001530
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
64.4828
0001030
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
25.0000
00030
0.0000