PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6201-6250 / 86044 show all
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
99.1404
98.4353
99.8557
46.9778
6921169211
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.7425
99.4863
100.0000
18.9415
581358200
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.3228
99.3228
99.3228
34.5643
440344033
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
97.1429
95.7746
98.5507
45.8824
136613621
50.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
93.8776
95.8333
92.0000
75.4902
2312321
50.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.3545
94.8454
100.0000
23.3333
9259200
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
asubramanian-gatkINDELD6_15map_l100_m0_e0*
93.0936
91.2621
95.0000
91.5896
9499551
20.0000
asubramanian-gatkINDELD6_15map_l100_m0_e0het
92.5620
93.3333
91.8033
92.7467
5645651
20.0000
asubramanian-gatkINDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
83.6364
1721800
asubramanian-gatkINDELD6_15map_l100_m0_e0homalt
93.3333
87.5000
100.0000
91.1765
2132100
asubramanian-gatkINDELD6_15map_l100_m1_e0*
93.4132
90.6977
96.2963
88.8224
2342423493
33.3333
asubramanian-gatkINDELD6_15map_l100_m1_e0het
91.9355
90.4762
93.4426
91.7344
1141211482
25.0000
asubramanian-gatkINDELD6_15map_l100_m1_e0hetalt
95.4545
92.6471
98.4375
73.3333
6356311
100.0000
asubramanian-gatkINDELD6_15map_l100_m1_e0homalt
94.2149
89.0625
100.0000
87.5546
5775700
asubramanian-gatkINDELD6_15map_l100_m2_e0*
93.3594
90.5303
96.3710
89.2314
2392523993
33.3333
asubramanian-gatkINDELD6_15map_l100_m2_e0het
91.8288
90.0763
93.6508
91.9796
1181311882
25.0000
asubramanian-gatkINDELD6_15map_l100_m2_e0hetalt
95.4545
92.6471
98.4375
74.5020
6356311
100.0000
asubramanian-gatkINDELD6_15map_l100_m2_e0homalt
94.3089
89.2308
100.0000
87.9418
5875800
asubramanian-gatkINDELD6_15map_l100_m2_e1*
93.4397
90.5455
96.5251
89.0301
2492625093
33.3333
asubramanian-gatkINDELD6_15map_l100_m2_e1het
92.0981
90.3704
93.8931
91.8176
1221312382
25.0000
asubramanian-gatkINDELD6_15map_l100_m2_e1hetalt
95.0355
91.7808
98.5294
74.4361
6766711
100.0000
asubramanian-gatkINDELD6_15map_l100_m2_e1homalt
94.4882
89.5522
100.0000
87.8543
6076000
asubramanian-gatkINDELD6_15map_l125_m0_e0*
94.3820
89.3617
100.0000
94.9766
4254300
asubramanian-gatkINDELD6_15map_l125_m0_e0het
96.4286
93.1034
100.0000
95.6240
2722700
asubramanian-gatkINDELD6_15map_l125_m0_e0hetalt
90.9091
83.3333
100.0000
90.9091
51600
asubramanian-gatkINDELD6_15map_l125_m0_e0homalt
90.9091
83.3333
100.0000
94.2197
1021000
asubramanian-gatkINDELD6_15map_l125_m1_e0*
94.7368
92.3077
97.2973
92.3183
108910831
33.3333
asubramanian-gatkINDELD6_15map_l125_m1_e0het
94.4882
93.7500
95.2381
93.7808
6046031
33.3333
asubramanian-gatkINDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
86.1789
1721700
asubramanian-gatkINDELD6_15map_l125_m1_e0homalt
95.3846
91.1765
100.0000
89.9676
3133100
asubramanian-gatkINDELD6_15map_l125_m2_e0*
94.2623
91.2698
97.4576
92.5174
1151111531
33.3333
asubramanian-gatkINDELD6_15map_l125_m2_e0het
94.2857
92.9577
95.6522
93.7838
6656631
33.3333
asubramanian-gatkINDELD6_15map_l125_m2_e0hetalt
94.4444
89.4737
100.0000
87.6812
1721700
asubramanian-gatkINDELD6_15map_l125_m2_e0homalt
94.1176
88.8889
100.0000
90.2736
3243200
asubramanian-gatkINDELD6_15map_l125_m2_e1*
93.9271
90.6250
97.4790
92.6407
1161211631
33.3333
asubramanian-gatkINDELD6_15map_l125_m2_e1het
94.2857
92.9577
95.6522
93.9314
6656631
33.3333
asubramanian-gatkINDELD6_15map_l125_m2_e1hetalt
91.8919
85.0000
100.0000
88.1119
1731700
asubramanian-gatkINDELD6_15map_l125_m2_e1homalt
94.2857
89.1892
100.0000
90.2077
3343300
asubramanian-gatkINDELD6_15map_l150_m0_e0*
96.7742
93.7500
100.0000
95.5840
3023100
asubramanian-gatkINDELD6_15map_l150_m0_e0het
97.4359
95.0000
100.0000
96.2451
1911900
asubramanian-gatkINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
89.4737
50600
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
73.3333
00040
0.0000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
99.2701
98.5507
100.0000
89.7436
6816800
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
97.7738
97.6852
97.8626
87.3723
1266301282287
25.0000
asubramanian-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
98.1239
97.7673
98.4831
88.4750
83219844137
53.8462