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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6151-6200 / 86044 show all
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
91.6225
98.8558
85.3755
48.1026
43254327467
90.5405
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
96.4244
95.8506
97.0051
52.0671
1321357213215408385
94.3627
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
96.9023
98.2941
95.5493
68.7291
3803663757175166
94.8571
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.8458
93.1665
98.6838
27.9872
662648666738986
96.6292
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.1397
99.2867
95.0836
54.6384
2784202785144133
92.3611
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.4970
97.1756
97.8206
52.8939
1076931310772240229
95.4167
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
97.7550
98.6561
96.8703
68.6124
323044321910499
95.1923
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.0075
95.3292
98.7460
27.5468
518425451976664
96.9697
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.2279
99.3671
97.1146
56.0984
23551523567066
94.2857
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
96.5878
96.0095
97.1732
53.9900
1419559014197413388
93.9467
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.1554
98.2906
96.0462
69.4738
4370764324178168
94.3820
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.8385
93.1558
98.6804
28.6536
668349167309087
96.6667
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.3969
99.2733
95.5900
55.8480
3142233143145133
91.7241
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.7435
96.0727
97.4237
57.9207
1697769416979449417
92.8731
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.2882
97.8105
96.7714
71.7102
57181285665189174
92.0635
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.9626
93.3863
98.6851
30.5076
7526533758010197
96.0396
asubramanian-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
97.4934
99.1237
95.9157
59.7456
3733333734159146
91.8239
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
96.9932
96.6906
97.2976
45.4909
91453139145254242
95.2756
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
97.0792
98.2071
95.9770
63.3202
2684492672112106
94.6429
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
96.5522
94.7192
98.4575
25.9492
452025245327169
97.1831
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
97.9067
99.3856
96.4712
41.4606
19411219417167
94.3662
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_51to200*
83.1975
80.3556
86.2477
45.5627
949232947151143
94.7020
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_51to200het
75.5642
91.2162
64.4970
75.8226
135131096059
98.3333
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
84.9521
75.2294
97.5610
27.3958
6562166801717
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
80.4071
98.1366
68.1034
35.1955
15831587467
90.5405
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.4357
99.2481
99.6241
82.5115
264226511
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.6764
99.3548
100.0000
84.7525
154115400
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.3328
97.2973
97.3684
61.6162
3613711
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
92.7273
89.4737
96.2264
99.5017
5165120
0.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
91.3580
88.0952
94.8718
99.3834
3753720
0.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
99.3191
81800
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8087
60600
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
98.9354
98.2913
99.5879
51.8136
36246336251511
73.3333
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
98.9657
98.3082
99.6321
61.0275
162728162563
50.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.6797
97.9695
99.4002
28.6675
115824116076
85.7143
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.2314
98.7059
99.7625
51.4137
8391184022
100.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200*
96.2278
94.9810
97.5078
52.7941
12496612523224
75.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200het
95.3450
94.8485
95.8466
76.3952
31317300137
53.8462
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
96.5279
94.3253
98.8357
24.3640
7484576498
88.8889
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
96.4103
97.9167
94.9495
46.7742
1884188109
90.0000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
99.3908
99.0173
99.7672
36.4175
171317171444
100.0000