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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1070 1071 1072 1073 1074 1075 1076 1077 1078 ... 1720 1721 » 53651-53700 / 86044 show all
hfeng-pmm2	SNP	ti	map_l250_m2_e0	homalt	99.5429	99.5998	99.4860	87.7706	1742	7	1742	9	2	22.2222
hfeng-pmm2	SNP	ti	map_l250_m2_e1	*	98.8122	99.1529	98.4739	90.0047	5033	43	5033	78	9	11.5385
hfeng-pmm2	SNP	ti	map_l250_m2_e1	het	98.4165	98.9088	97.9292	90.8817	3263	36	3263	69	7	10.1449
hfeng-pmm2	SNP	ti	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	87.5000	5	0	5	0	0
hfeng-pmm2	SNP	ti	map_l250_m2_e1	homalt	99.5488	99.6050	99.4927	87.8092	1765	7	1765	9	2	22.2222
hfeng-pmm2	SNP	ti	map_siren	*	99.6860	99.6642	99.7079	54.6933	100018	337	100003	293	39	13.3106
hfeng-pmm2	SNP	ti	map_siren	het	99.5502	99.5223	99.5781	56.1068	62084	298	62075	263	19	7.2243
hfeng-pmm2	SNP	ti	map_siren	hetalt	99.1150	98.2456	100.0000	73.3333	56	1	56	0	0
hfeng-pmm2	SNP	ti	map_siren	homalt	99.9103	99.8998	99.9208	52.1071	37878	38	37872	30	20	66.6667
hfeng-pmm2	SNP	ti	segdup	*	99.6754	99.8157	99.5355	89.6871	19501	36	19499	91	9	9.8901
hfeng-pmm2	SNP	ti	segdup	het	99.5229	99.7257	99.3210	90.4269	11997	33	11995	82	0	0.0000
hfeng-pmm2	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.9011	2	0	2	0	0
hfeng-pmm2	SNP	ti	segdup	homalt	99.9201	99.9600	99.8802	88.1936	7502	3	7502	9	9	100.0000
hfeng-pmm2	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	ti	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	ti	tech_badpromoters	*	98.8235	98.8235	98.8235	44.8052	84	1	84	1	1	100.0000
hfeng-pmm2	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	46.2500	43	1	43	0	0
hfeng-pmm2	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	43.2432	41	0	41	1	1	100.0000
hfeng-pmm2	SNP	tv	*	*	99.9268	99.9066	99.9471	21.6564	968784	906	968705	513	42	8.1871
hfeng-pmm2	SNP	tv	*	het	99.8886	99.8560	99.9212	22.0414	590844	852	590770	466	18	3.8627
hfeng-pmm2	SNP	tv	*	hetalt	99.8851	99.7704	100.0000	49.0323	869	2	869	0	0
hfeng-pmm2	SNP	tv	*	homalt	99.9869	99.9862	99.9875	20.9465	377071	52	377066	47	24	51.0638
hfeng-pmm2	SNP	tv	HG002complexvar	*	99.8387	99.7038	99.9739	21.6976	245423	729	245339	64	21	32.8125
hfeng-pmm2	SNP	tv	HG002complexvar	het	99.7540	99.5389	99.9700	20.7785	150036	695	149957	45	8	17.7778
hfeng-pmm2	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.9610	308	2	308	0	0
hfeng-pmm2	SNP	tv	HG002complexvar	homalt	99.9732	99.9664	99.9800	23.0303	95079	32	95074	19	13	68.4211
hfeng-pmm2	SNP	tv	HG002compoundhet	*	96.9561	94.2396	99.8337	46.6519	8409	514	8407	14	7	50.0000
hfeng-pmm2	SNP	tv	HG002compoundhet	het	94.2146	89.2146	99.8084	51.8565	4169	504	4167	8	2	25.0000
hfeng-pmm2	SNP	tv	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	23.2143	860	2	860	0	0
hfeng-pmm2	SNP	tv	HG002compoundhet	homalt	99.7933	99.7639	99.8228	43.5008	3380	8	3380	6	5	83.3333
hfeng-pmm2	SNP	tv	decoy	*		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	decoy	het		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	func_cds	*	99.9200	100.0000	99.8401	29.0024	4371	0	4370	7	0	0.0000
hfeng-pmm2	SNP	tv	func_cds	het	99.8684	100.0000	99.7371	30.5787	2657	0	2656	7	0	0.0000
hfeng-pmm2	SNP	tv	func_cds	hetalt	100.0000	100.0000	100.0000	62.9630	10	0	10	0	0
hfeng-pmm2	SNP	tv	func_cds	homalt	100.0000	100.0000	100.0000	25.9774	1704	0	1704	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	97.8866	96.2401	99.5904	67.7099	1459	57	1459	6	1	16.6667
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.9477	94.4556	99.5749	66.5601	937	55	937	4	0	0.0000
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	69.2308	522	2	522	2	1	50.0000
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3792	98.9089	99.8541	63.0972	27376	302	27367	40	7	17.5000

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