PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5301-5350 / 86044 show all
asubramanian-gatkINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.1053
30300
asubramanian-gatkINDELI6_15map_l150_m1_e0homalt
72.7273
57.1429
100.0000
97.3510
43400
asubramanian-gatkINDELI6_15map_l150_m2_e0*
81.8182
72.0000
94.7368
96.8333
1871811
100.0000
asubramanian-gatkINDELI6_15map_l150_m2_e0het
81.4815
73.3333
91.6667
96.8504
1141111
100.0000
asubramanian-gatkINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.4783
30300
asubramanian-gatkINDELI6_15map_l150_m2_e0homalt
72.7273
57.1429
100.0000
97.6879
43400
asubramanian-gatkINDELI6_15map_l150_m2_e1*
83.3333
74.0741
95.2381
96.6346
2072011
100.0000
asubramanian-gatkINDELI6_15map_l150_m2_e1het
82.7586
75.0000
92.3077
96.7089
1241211
100.0000
asubramanian-gatkINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
93.7500
30300
asubramanian-gatkINDELI6_15map_l150_m2_e1homalt
76.9231
62.5000
100.0000
97.2376
53500
asubramanian-gatkINDELI6_15map_l250_m0_e0*
0.0000
0.0000
99.2806
01011
100.0000
asubramanian-gatkINDELI6_15map_l250_m0_e0het
0.0000
0.0000
98.9691
00011
100.0000
asubramanian-gatkINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
asubramanian-gatkINDELI6_15map_l250_m1_e0*
67.7966
57.1429
83.3333
98.1928
43511
100.0000
asubramanian-gatkINDELI6_15map_l250_m1_e0het
77.4194
75.0000
80.0000
97.7376
31411
100.0000
asubramanian-gatkINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15map_l250_m1_e0homalt
50.0000
33.3333
100.0000
98.9130
12100
asubramanian-gatkINDELI6_15map_l250_m2_e0*
71.4286
62.5000
83.3333
98.3380
53511
100.0000
asubramanian-gatkINDELI6_15map_l250_m2_e0het
80.0000
80.0000
80.0000
97.9424
41411
100.0000
asubramanian-gatkINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15map_l250_m2_e0homalt
50.0000
33.3333
100.0000
98.9691
12100
asubramanian-gatkINDELI6_15map_l250_m2_e1*
71.4286
62.5000
83.3333
98.4127
53511
100.0000
asubramanian-gatkINDELI6_15map_l250_m2_e1het
80.0000
80.0000
80.0000
98.0315
41411
100.0000
asubramanian-gatkINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15map_l250_m2_e1homalt
50.0000
33.3333
100.0000
99.0099
12100
asubramanian-gatkINDELI6_15map_siren*
94.0200
90.1639
98.2206
86.0753
2753027653
60.0000
asubramanian-gatkINDELI6_15map_sirenhet
91.3236
84.6154
99.1870
88.4507
1212212211
100.0000
asubramanian-gatkINDELI6_15map_sirenhetalt
97.1831
95.8333
98.5714
77.4194
6936910
0.0000
asubramanian-gatkINDELI6_15map_sirenhomalt
95.5056
94.4444
96.5909
86.3142
8558532
66.6667
asubramanian-gatkINDELI6_15segdup*
97.9592
96.0000
100.0000
93.3884
168716800
asubramanian-gatkINDELI6_15segduphet
97.5309
95.1807
100.0000
94.6038
7947900
asubramanian-gatkINDELI6_15segduphetalt
97.7273
95.5556
100.0000
90.1149
4324300
asubramanian-gatkINDELI6_15segduphomalt
98.9247
97.8723
100.0000
92.8349
4614600
asubramanian-gatkINDELI6_15segdupwithalt*
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15segdupwithalthet
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
asubramanian-gatkINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
asubramanian-gatkINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
asubramanian-gatkINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
asubramanian-gatkSNP***
98.9379
97.9985
99.8954
21.0150
29934806113929933433133150
4.7877
asubramanian-gatkSNP**het
98.9725
98.1066
99.8538
23.0377
18381133547418379992691109
4.0505
asubramanian-gatkSNP**hetalt
94.8157
94.4891
95.1445
47.6709
82348823422
4.7619
asubramanian-gatkSNP**homalt
98.8858
97.8294
99.9654
17.5292
115454425617115452140039
9.7500
asubramanian-gatkSNP*HG002complexvar*
98.2310
96.5837
99.9354
19.5730
7286092577272846647154
11.4650
asubramanian-gatkSNP*HG002complexvarhet
98.3318
96.7914
99.9221
19.0611
4505611493645044235131
8.8319
asubramanian-gatkSNP*HG002complexvarhetalt
93.8843
91.6129
96.2712
41.3519
28426284110
0.0000
asubramanian-gatkSNP*HG002complexvarhomalt
98.0724
96.2540
99.9608
20.3588
2777641081027774010923
21.1009