PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5201-5250 / 86044 show all
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.0392
96.1538
100.0000
60.7692
5025100
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
97.0588
97.0588
97.0588
71.0638
6626622
100.0000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
91.2631
87.6866
95.1439
62.7595
470665292723
85.1852
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
92.2724
89.9329
94.7368
76.4706
1341514484
50.0000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.0086
86.2259
98.6226
46.2222
3135035855
100.0000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
78.0641
95.8333
65.8537
76.1628
231271414
100.0000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
94.7579
92.9553
96.6318
48.7341
32462464246148137
92.5676
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
96.2350
95.0135
97.4884
66.2374
7053710482719
70.3704
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.2667
91.9260
98.8593
33.2487
233420528603331
93.9394
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
87.7317
98.1043
79.3427
59.5442
20743388887
98.8636
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
95.2810
93.7940
96.8159
46.5107
27961853740123114
92.6829
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
96.8792
96.0199
97.7540
64.3266
579249142115
71.4286
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
95.7443
92.7854
98.8981
31.4540
203215825132826
92.8571
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
88.7848
98.4043
80.8786
56.7114
18533137473
98.6486
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
94.8288
92.9433
96.7925
52.5751
36222754617153140
91.5033
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.2829
94.9045
97.7021
68.8472
8944812332919
65.5172
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.1496
91.6793
98.8930
34.8700
242422029483331
93.9394
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
89.6161
97.7492
82.7324
63.1469
30474369190
98.9011
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
95.8179
94.0683
97.6337
60.8078
59473756973169154
91.1243
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.8703
95.1801
98.6216
73.1527
18769522183119
61.2903
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.6730
92.4844
99.0893
41.0583
326126538083533
94.2857
asubramanian-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
94.0166
98.1818
90.1905
68.4305
81015947103102
99.0291
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
94.9172
93.4909
96.3878
56.5468
22551573122117109
93.1624
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
97.0574
96.7213
97.3958
75.1053
472167482014
70.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
95.2682
92.0384
98.7330
37.3051
163014121042726
96.2963
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
88.5246
100.0000
79.4118
64.9485
15302707069
98.5714
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
78.9522
71.7391
87.7778
55.4455
6626791110
90.9091
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
64.1221
77.7778
54.5455
85.3333
72654
80.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
81.6845
71.0843
96.0000
30.5556
59247233
100.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
25.0000
78.9474
00133
100.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
97.6898
95.4839
100.0000
83.3147
148714900
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
98.3607
96.7742
100.0000
86.6521
6026100
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
95.2381
90.9091
100.0000
76.7442
4044000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.9691
97.9592
100.0000
81.8182
4814800
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8725
20200
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.4398
20200
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
97.6198
95.9122
99.3894
60.1406
126754146595
55.5556
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
96.9948
94.8276
99.2634
69.4944
4402453941
25.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
97.7907
95.9438
99.7101
42.8335
6152668821
50.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
98.4507
98.1481
98.7552
66.1041
212423833
100.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
93.3929
89.2473
97.9424
67.1177
1662023854
80.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
87.4751
80.0000
96.4912
84.4687
2875521
50.0000
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
95.5017
91.3907
100.0000
45.7576
1381317900
asubramanian-gatkINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
57.1429
83.3333
00433
100.0000