PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84301-84350 / 86044 show all
ltrigg-rtg2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.1014
10200
ltrigg-rtg2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0588
10200
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
67.5000
1201300
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
40.2266
211021100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
67.6471
1201100
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
98.3607
10100
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
94.4444
10100
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
98.3607
10100
jmaeng-gatkINDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
96.6759
1201200
jmaeng-gatkINDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
jmaeng-gatkINDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
jmaeng-gatkINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9760
40400
jmaeng-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9864
20200
jmaeng-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.7050
10100
jmaeng-gatkINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9403
10100
jmaeng-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
33.9286
7407400
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8718
1101100
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7402
80800
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.9697
10100
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3485
20200
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9213
1001000
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8353
70700
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3289
20200
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.9592
10100
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0588
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9919
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6155
13300133000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
87.7358
1301300
jmaeng-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3415
1301300
jmaeng-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9960
10100
jmaeng-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9948
10100
jmaeng-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
jmaeng-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
jmaeng-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9558
10100
jmaeng-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.2754
10100
jmaeng-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.0000
4304300
jmaeng-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
56.0606
2902900
jmaeng-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1831
60600
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8102
30300
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8723
40400
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3740
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200