PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83651-83700 / 86044 show all
rpoplin-dv42INDEL*map_l150_m1_e0hetalt
93.0233
95.2381
90.9091
95.7447
2012020
0.0000
rpoplin-dv42INDEL*map_l150_m1_e0homalt
98.7013
98.7013
98.7013
88.1081
456645665
83.3333
rpoplin-dv42INDEL*map_l150_m2_e0*
97.9323
97.4432
98.4263
99.0377
13723613762210
45.4545
rpoplin-dv42INDEL*map_l150_m2_e0het
97.6106
96.7991
98.4358
89.4308
87729881145
35.7143
rpoplin-dv42INDEL*map_l150_m2_e0hetalt
93.0233
95.2381
90.9091
96.2901
2012020
0.0000
rpoplin-dv42INDEL*map_l150_m2_e0homalt
98.7526
98.7526
98.7526
89.0183
475647565
83.3333
rpoplin-dv42INDEL*map_l150_m2_e1*
97.8375
97.3593
98.3205
99.0326
14013814052412
50.0000
rpoplin-dv42INDEL*map_l150_m2_e1het
97.5486
96.7532
98.3571
89.4487
89430898156
40.0000
rpoplin-dv42INDEL*map_l150_m2_e1hetalt
91.3043
91.3043
91.3043
96.2602
2122120
0.0000
rpoplin-dv42INDEL*map_l150_m2_e1homalt
98.6802
98.7805
98.5801
89.0274
486648676
85.7143
rpoplin-dv42INDEL*map_l250_m0_e0*
92.9936
93.5897
92.4051
99.8422
7357362
33.3333
rpoplin-dv42INDEL*map_l250_m0_e0het
92.4528
92.4528
92.4528
97.6318
4944941
25.0000
rpoplin-dv42INDEL*map_l250_m0_e0hetalt
0.0000
0.0000
99.3464
00010
0.0000
rpoplin-dv42INDEL*map_l250_m0_e0homalt
96.0000
96.0000
96.0000
97.4093
2412411
100.0000
rpoplin-dv42INDEL*map_l250_m1_e0*
96.0396
95.4098
96.6777
99.6478
29114291105
50.0000
rpoplin-dv42INDEL*map_l250_m1_e0het
95.4667
94.2105
96.7568
95.6957
1791117963
50.0000
rpoplin-dv42INDEL*map_l250_m1_e0hetalt
92.3077
100.0000
85.7143
97.7564
60610
0.0000
rpoplin-dv42INDEL*map_l250_m1_e0homalt
97.2477
97.2477
97.2477
94.7596
106310632
66.6667
rpoplin-dv42INDEL*map_l250_m2_e0*
96.3526
95.7704
96.9419
99.6591
31714317105
50.0000
rpoplin-dv42INDEL*map_l250_m2_e0het
95.9036
94.7619
97.0732
95.8061
1991119963
50.0000
rpoplin-dv42INDEL*map_l250_m2_e0hetalt
92.3077
100.0000
85.7143
98.1333
60610
0.0000
rpoplin-dv42INDEL*map_l250_m2_e0homalt
97.3913
97.3913
97.3913
95.1963
112311232
66.6667
rpoplin-dv42INDEL*map_l250_m2_e1*
96.3746
95.7958
96.9605
99.6645
31914319105
50.0000
rpoplin-dv42INDEL*map_l250_m2_e1het
95.9233
94.7867
97.0874
95.8874
2001120063
50.0000
rpoplin-dv42INDEL*map_l250_m2_e1hetalt
92.3077
100.0000
85.7143
98.1771
60610
0.0000
rpoplin-dv42INDEL*map_l250_m2_e1homalt
97.4138
97.4138
97.4138
95.3036
113311332
66.6667
rpoplin-dv42INDEL*map_siren*
98.4035
98.0972
98.7117
97.1910
726914172799549
51.5789
rpoplin-dv42INDEL*map_sirenhet
98.2013
98.0257
98.3774
81.3714
44198944267337
50.6849
rpoplin-dv42INDEL*map_sirenhetalt
93.4218
89.0688
98.2222
87.9936
2202722141
25.0000
rpoplin-dv42INDEL*map_sirenhomalt
99.1894
99.0584
99.3208
79.6138
26302526321811
61.1111
rpoplin-dv42INDEL*segdup*
98.8630
98.5915
99.1359
99.1675
25203625242221
95.4545
rpoplin-dv42INDEL*segduphet
98.8084
98.8404
98.7763
94.3566
14491714531817
94.4444
rpoplin-dv42INDEL*segduphetalt
96.4143
93.0769
100.0000
95.1464
121912100
rpoplin-dv42INDEL*segduphomalt
99.2685
98.9583
99.5807
93.3565
9501095044
100.0000
rpoplin-dv42INDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9996
10100
rpoplin-dv42INDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9953
10100
rpoplin-dv42INDEL*segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*tech_badpromoters*
98.6842
98.6842
98.6842
90.5824
7517511
100.0000
rpoplin-dv42INDEL*tech_badpromotershet
98.7342
100.0000
97.5000
49.3671
3903911
100.0000
rpoplin-dv42INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDEL*tech_badpromotershomalt
98.4615
96.9697
100.0000
60.9756
3213200
rpoplin-dv42INDELC16_PLUS**
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*het
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000