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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1650 1651 1652 1653 1654 1655 1656 1657 1658 ... 1720 1721 » 82651-82700 / 86044 show all
raldana-dualsentieon	SNP	ti	map_siren	het	99.3661	99.3941	99.3382	55.1273	62004	378	61995	413	8	1.9371
raldana-dualsentieon	SNP	ti	map_siren	hetalt	98.2456	98.2456	98.2456	65.4545	56	1	56	1	1	100.0000
raldana-dualsentieon	SNP	ti	map_siren	homalt	99.8878	99.8127	99.9630	48.3820	37845	71	37839	14	14	100.0000
raldana-dualsentieon	SNP	ti	segdup	*	99.6041	99.8055	99.4035	89.2386	19499	38	19497	117	4	3.4188
raldana-dualsentieon	SNP	ti	segdup	het	99.4118	99.7672	99.0589	90.1934	12002	28	12000	114	1	0.8772
raldana-dualsentieon	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.3333	2	0	2	0	0
raldana-dualsentieon	SNP	ti	segdup	homalt	99.9134	99.8668	99.9600	87.2078	7495	10	7495	3	3	100.0000
raldana-dualsentieon	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	ti	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	42.8571	83	2	83	1	1	100.0000
raldana-dualsentieon	SNP	ti	tech_badpromoters	het	97.6744	95.4545	100.0000	44.7368	42	2	42	0	0
raldana-dualsentieon	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	40.8451	41	0	41	1	1	100.0000
raldana-dualsentieon	SNP	tv	*	*	99.9049	99.8971	99.9127	21.2799	968692	998	968612	846	44	5.2010
raldana-dualsentieon	SNP	tv	*	het	99.8532	99.8447	99.8617	22.1748	590777	919	590703	818	22	2.6895
raldana-dualsentieon	SNP	tv	*	hetalt	99.7125	99.5408	99.8848	38.3960	867	4	867	1	1	100.0000
raldana-dualsentieon	SNP	tv	*	homalt	99.9865	99.9801	99.9928	19.7814	377048	75	377042	27	21	77.7778
raldana-dualsentieon	SNP	tv	HG002complexvar	*	99.8458	99.7136	99.9784	21.7224	245447	705	245362	53	18	33.9623
raldana-dualsentieon	SNP	tv	HG002complexvar	het	99.7643	99.5575	99.9720	20.9789	150064	667	149985	42	9	21.4286
raldana-dualsentieon	SNP	tv	HG002complexvar	hetalt	99.5138	99.0323	100.0000	35.3684	307	3	307	0	0
raldana-dualsentieon	SNP	tv	HG002complexvar	homalt	99.9758	99.9632	99.9884	22.8157	95076	35	95070	11	9	81.8182
raldana-dualsentieon	SNP	tv	HG002compoundhet	*	96.9959	94.2620	99.8931	47.1699	8411	512	8410	9	5	55.5556
raldana-dualsentieon	SNP	tv	HG002compoundhet	het	94.2957	89.3216	99.8564	53.2191	4174	499	4172	6	3	50.0000
raldana-dualsentieon	SNP	tv	HG002compoundhet	hetalt	99.7674	99.5360	100.0000	22.0708	858	4	858	0	0
raldana-dualsentieon	SNP	tv	HG002compoundhet	homalt	99.8228	99.7344	99.9113	42.6999	3379	9	3380	3	2	66.6667
raldana-dualsentieon	SNP	tv	decoy	*		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	decoy	het		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	func_cds	*	99.8743	99.9771	99.7716	27.8940	4370	1	4369	10	0	0.0000
raldana-dualsentieon	SNP	tv	func_cds	het	99.7933	99.9624	99.6248	29.8500	2656	1	2655	10	0	0.0000
raldana-dualsentieon	SNP	tv	func_cds	hetalt	100.0000	100.0000	100.0000	56.5217	10	0	10	0	0
raldana-dualsentieon	SNP	tv	func_cds	homalt	100.0000	100.0000	100.0000	24.3003	1704	0	1704	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	98.0221	96.4380	99.6592	65.6762	1462	54	1462	5	2	40.0000
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	97.1576	94.7581	99.6819	66.9239	940	52	940	3	1	33.3333
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	63.0465	522	2	522	2	1	50.0000
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3348	99.0173	99.6544	63.3928	27406	272	27397	95	13	13.6842
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.9932	98.5200	99.4710	64.4487	17308	260	17299	92	10	10.8696
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	81.5385	12	1	12	0	0
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9306	99.8911	99.9703	61.3700	10086	11	10086	3	3	100.0000
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.8505	98.2637	99.4444	73.4266	14318	253	14318	80	15	18.7500
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.2933	97.4269	99.1752	74.7089	8898	235	8898	74	10	13.5135
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	100.0000	100.0000	100.0000	85.1485	15	0	15	0	0

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