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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
77551-77600 / 86044 show all
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
76.3516
67.9439
87.1341
64.1684
218110292262334260
77.8443
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
84.8521
85.8447
83.8821
72.0175
752124968186175
94.0860
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
62.1033
45.2072
99.1667
43.6090
73188659554
80.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
89.6138
97.3501
83.0166
59.0666
6981969914381
56.6434
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
77.4939
68.7532
88.7808
66.4783
13296041369173122
70.5202
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
88.7211
90.1328
87.3529
74.4841
475525948681
94.1860
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
59.5731
42.4788
99.6904
42.1147
40154332211
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
90.5095
98.0519
84.0445
60.8569
45394538640
46.5116
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
79.5452
72.3383
88.3470
65.9371
294211253025399313
78.4461
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
86.9083
88.9474
84.9606
72.8067
11831471401248226
91.1290
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
62.3929
45.5428
99.0338
45.1898
75189861565
83.3333
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
89.9656
92.6471
87.4350
59.5797
100880100914582
56.5517
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
80.5286
73.7548
88.6726
69.8081
368713123781483366
75.7764
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
87.6321
89.4447
85.8915
75.4124
16271921869307263
85.6678
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
63.7991
47.0741
98.9583
49.3404
909102276085
62.5000
ndellapenna-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
89.6468
92.1537
87.2727
64.8656
115198115216898
58.3333
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
77.5367
69.6429
87.4488
64.9114
12485441282184127
69.0217
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
86.6705
87.5205
85.8369
72.0400
533766009982
82.8283
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
60.0653
42.9847
99.6711
45.3237
33744730311
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
87.8275
94.7368
81.8575
58.7344
378213798444
52.3810
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
65.0860
56.7347
76.3203
57.3091
417318448139119
85.6115
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
70.5915
71.0059
70.1818
64.6075
120491938277
93.9024
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
56.8714
40.0911
97.8102
43.3884
17626313432
66.6667
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
80.1325
95.2756
69.1429
50.8427
12161215440
74.0741
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
95.2451
91.9540
98.7805
77.4105
8078111
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
98.0581
98.0769
98.0392
78.7500
5115011
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
73.6842
58.3333
100.0000
50.0000
75900
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
97.7778
95.6522
100.0000
79.0476
2212200
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
79.6748
72.0588
89.0909
96.9846
49194966
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
78.9474
68.1818
93.7500
97.4194
30143022
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
80.0000
66.6667
100.0000
89.2857
63600
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
81.2500
86.6667
76.4706
96.7803
1321344
100.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
85.7237
78.9364
93.7881
67.9922
7572027705138
74.5098
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
93.0643
93.0175
93.1111
72.1190
373284193126
83.8710
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
67.0371
50.6098
99.2537
54.5763
16616213310
0.0000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
93.3619
94.7826
91.9831
63.8720
218122181912
63.1579
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
81.2239
74.1883
89.7338
67.9659
4571594725443
79.6296
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
83.3504
84.7561
81.9905
78.4033
139251733834
89.4737
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
76.9656
63.1429
98.5366
46.7532
22112920231
33.3333
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
91.5094
95.0980
88.1818
60.7143
97597138
61.5385
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.7421
20200