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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 512 513 514 515 516 517 518 519 520 ... 1720 1721 » 25751-25800 / 86044 show all
dgrover-gatk	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	*	*	97.8781	98.0395	97.7172	70.6733	6651	133	6635	155	103	66.4516
dgrover-gatk	INDEL	D16_PLUS	*	het	97.8168	99.3036	96.3739	78.4222	3137	22	2897	109	66	60.5505
dgrover-gatk	INDEL	D16_PLUS	*	hetalt	96.8869	94.5680	99.3224	39.0920	1828	105	2052	14	14	100.0000
dgrover-gatk	INDEL	D16_PLUS	*	homalt	98.8856	99.6454	98.1374	70.5317	1686	6	1686	32	23	71.8750
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	*	97.6446	97.6263	97.6630	66.8096	1604	39	1588	38	27	71.0526
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	het	98.2761	98.7353	97.8211	68.7119	1093	14	853	19	9	47.3684
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	93.7238	90.6883	96.9697	48.0899	224	23	448	14	14	100.0000
dgrover-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.7952	99.3080	98.2877	76.1047	287	2	287	5	4	80.0000
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	*	95.7397	95.5147	95.9657	35.4749	2236	105	2236	94	91	96.8085
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	het	89.2587	99.2593	81.0888	59.0856	402	3	283	66	63	95.4545
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	hetalt	97.0887	94.7095	99.5904	26.5237	1826	102	1945	8	8	100.0000
dgrover-gatk	INDEL	D16_PLUS	HG002compoundhet	homalt	44.4444	100.0000	28.5714	72.0000	8	0	8	20	20	100.0000
dgrover-gatk	INDEL	D16_PLUS	decoy	*	100.0000	100.0000	100.0000	99.2840	6	0	6	0	0
dgrover-gatk	INDEL	D16_PLUS	decoy	het	100.0000	100.0000	100.0000	99.3344	4	0	4	0	0
dgrover-gatk	INDEL	D16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	99.0148	2	0	2	0	0
dgrover-gatk	INDEL	D16_PLUS	func_cds	*	100.0000	100.0000	100.0000	80.3279	12	0	12	0	0
dgrover-gatk	INDEL	D16_PLUS	func_cds	het	100.0000	100.0000	100.0000	82.6087	8	0	8	0	0
dgrover-gatk	INDEL	D16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	73.3333	4	0	4	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	95.6094	95.5357	95.6831	73.2283	2033	95	2017	91	76	83.5165
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.2637	97.8947	89.0511	87.2350	651	14	488	60	49	81.6667
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	95.4946	92.1026	99.1461	40.7199	898	77	1045	9	9	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	97.3843	99.1803	95.6522	71.9357	484	4	484	22	18	81.8182
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	88.8889	100.0000	80.0000	99.4166	4	0	4	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	99.8428	1	0	1	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	93.3333	1	0	1	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	80.0000	100.0000	66.6667	98.5437	2	0	2	1	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.3726	98.4555	98.2899	71.9884	3506	55	3506	61	44	72.1311
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.0391	99.4096	96.7059	82.8744	1347	8	1233	42	28	66.6667
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.9833	96.5224	99.4891	37.1848	1249	45	1363	7	7	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2366	99.7807	98.6985	70.3346	910	2	910	12	9	75.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.2689	97.4195	97.1188	75.1529	4870	129	4854	144	103	71.5278
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	96.4629	98.9555	94.0928	85.7865	1800	19	1561	98	66	67.3469
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.9108	94.6142	99.3217	39.0251	1827	104	2050	14	14	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.4945	99.5196	97.4902	74.7924	1243	6	1243	32	23	71.8750

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