PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
24201-24250 / 86044 show all
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
96.9476
94.0760
100.0000
38.5189
106467107100
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.4862
100.0000
98.9777
68.5196
1065010651111
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200*
95.3668
91.8216
99.1968
76.6417
2472224721
50.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200het
94.6218
92.1569
97.2222
94.1368
4743510
0.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
95.6731
91.7051
100.0000
35.4740
1991821100
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
66.6667
100.0000
50.0000
98.4000
10111
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
98.9445
98.1905
99.7101
62.5272
103119103233
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_11to50het
99.3592
98.9362
99.7859
69.6359
465546611
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
97.7124
95.5272
100.0000
30.1402
2991429900
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.6269
100.0000
99.2565
66.2060
267026722
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
96.0000
96.0000
96.0000
62.6866
2412410
0.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
91.8919
20210
0.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
97.7778
95.6522
100.0000
8.3333
2212200
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5map_l100_m0_e0*
97.3193
96.8692
97.7737
89.6605
52617527122
16.6667
ckim-vqsrINDELI1_5map_l100_m0_e0het
95.9671
94.7853
97.1787
91.9444
3091731090
0.0000
ckim-vqsrINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.0233
90900
ckim-vqsrINDELI1_5map_l100_m0_e0homalt
99.2840
100.0000
98.5782
81.2278
208020832
66.6667
ckim-vqsrINDELI1_5map_l100_m1_e0*
97.7372
96.7140
98.7823
87.5119
1295441298164
25.0000
ckim-vqsrINDELI1_5map_l100_m1_e0het
96.5955
94.8520
98.4043
89.8378
73740740121
8.3333
ckim-vqsrINDELI1_5map_l100_m1_e0hetalt
96.4706
93.1818
100.0000
88.4507
4134100
ckim-vqsrINDELI1_5map_l100_m1_e0homalt
99.5188
99.8069
99.2322
81.1709
517151743
75.0000
ckim-vqsrINDELI1_5map_l100_m2_e0*
97.7479
96.7105
98.8077
88.3990
1323451326164
25.0000
ckim-vqsrINDELI1_5map_l100_m2_e0het
96.5990
94.8298
98.4355
90.5728
75241755121
8.3333
ckim-vqsrINDELI1_5map_l100_m2_e0hetalt
96.4706
93.1818
100.0000
89.3782
4134100
ckim-vqsrINDELI1_5map_l100_m2_e0homalt
99.5305
99.8117
99.2509
82.4688
530153043
75.0000
ckim-vqsrINDELI1_5map_l100_m2_e1*
97.7178
96.6308
98.8296
88.4427
1348471351164
25.0000
ckim-vqsrINDELI1_5map_l100_m2_e1het
96.5415
94.6914
98.4655
90.6122
76743770121
8.3333
ckim-vqsrINDELI1_5map_l100_m2_e1hetalt
96.5517
93.3333
100.0000
89.3401
4234200
ckim-vqsrINDELI1_5map_l100_m2_e1homalt
99.5383
99.8148
99.2634
82.5064
539153943
75.0000
ckim-vqsrINDELI1_5map_l125_m0_e0*
96.9502
97.4194
96.4856
92.5352
3028302111
9.0909
ckim-vqsrINDELI1_5map_l125_m0_e0het
95.5844
95.8333
95.3368
94.0906
184818490
0.0000
ckim-vqsrINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
95.7447
40400
ckim-vqsrINDELI1_5map_l125_m0_e0homalt
99.1304
100.0000
98.2759
86.0744
114011421
50.0000
ckim-vqsrINDELI1_5map_l125_m1_e0*
97.3838
96.3855
98.4029
90.0233
80030801132
15.3846
ckim-vqsrINDELI1_5map_l125_m1_e0het
95.8095
94.0329
97.6546
92.0238
45729458111
9.0909
ckim-vqsrINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.0612
1701700
ckim-vqsrINDELI1_5map_l125_m1_e0homalt
99.5420
99.6942
99.3902
83.8741
326132621
50.0000
ckim-vqsrINDELI1_5map_l125_m2_e0*
97.4066
96.3827
98.4524
90.8257
82631827132
15.3846
ckim-vqsrINDELI1_5map_l125_m2_e0het
95.7972
93.9638
97.7035
92.7237
46730468111
9.0909
ckim-vqsrINDELI1_5map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.2143
1901900
ckim-vqsrINDELI1_5map_l125_m2_e0homalt
99.5608
99.7067
99.4152
85.0850
340134021
50.0000
ckim-vqsrINDELI1_5map_l125_m2_e1*
97.3861
96.3218
98.4742
90.8974
83832839132
15.3846
ckim-vqsrINDELI1_5map_l125_m2_e1het
95.7853
93.8976
97.7505
92.7437
47731478111
9.0909
ckim-vqsrINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
93.3333
1901900
ckim-vqsrINDELI1_5map_l125_m2_e1homalt
99.5633
99.7085
99.4186
85.2740
342134221
50.0000