PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
23651-23700 / 86044 show all
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
95.1278
98.7805
91.7355
88.1139
1622111108
80.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
96.7378
94.8571
98.6945
34.1924
3321837855
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
98.0583
99.0196
97.1154
64.3836
101110133
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
99.3671
100.0000
98.7421
70.8257
157015720
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
98.3051
100.0000
96.6667
82.3529
6105820
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
66.6667
4504500
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
94.5055
93.4783
95.5556
67.1533
4334322
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
77.4194
75.0000
80.0000
92.1875
62411
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
97.9592
96.0000
100.0000
42.2222
2412600
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.2963
100.0000
92.8571
50.0000
1301311
100.0000
ckim-vqsrINDELD16_PLUSmap_l100_m0_e0*
89.6552
92.8571
86.6667
97.1910
2622640
0.0000
ckim-vqsrINDELD16_PLUSmap_l100_m0_e0het
89.6047
94.7368
85.0000
97.5248
1811730
0.0000
ckim-vqsrINDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
89.3617
40500
ckim-vqsrINDELD16_PLUSmap_l100_m0_e0homalt
80.0000
80.0000
80.0000
97.6526
41410
0.0000
ckim-vqsrINDELD16_PLUSmap_l100_m1_e0*
89.8876
91.9540
87.9121
95.3737
80780114
36.3636
ckim-vqsrINDELD16_PLUSmap_l100_m1_e0het
88.7014
95.6522
82.6923
96.3989
4424394
44.4444
ckim-vqsrINDELD16_PLUSmap_l100_m1_e0hetalt
91.6667
84.6154
100.0000
76.7677
2242300
ckim-vqsrINDELD16_PLUSmap_l100_m1_e0homalt
90.3226
93.3333
87.5000
96.2264
1411420
0.0000
ckim-vqsrINDELD16_PLUSmap_l100_m2_e0*
90.2174
92.2222
88.2979
95.8952
83783114
36.3636
ckim-vqsrINDELD16_PLUSmap_l100_m2_e0het
88.9670
95.8333
83.0189
96.8187
4624494
44.4444
ckim-vqsrINDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
77.5701
2242400
ckim-vqsrINDELD16_PLUSmap_l100_m2_e0homalt
90.9091
93.7500
88.2353
96.7118
1511520
0.0000
ckim-vqsrINDELD16_PLUSmap_l100_m2_e1*
90.3553
91.7526
89.0000
95.7301
89889114
36.3636
ckim-vqsrINDELD16_PLUSmap_l100_m2_e1het
89.5935
96.0784
83.9286
96.7136
4924794
44.4444
ckim-vqsrINDELD16_PLUSmap_l100_m2_e1hetalt
90.9091
83.3333
100.0000
76.7241
2552700
ckim-vqsrINDELD16_PLUSmap_l100_m2_e1homalt
90.9091
93.7500
88.2353
96.7433
1511520
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m0_e0*
96.0000
100.0000
92.3077
97.8003
1201210
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m0_e0het
94.7368
100.0000
90.0000
97.8678
90910
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
10100
ckim-vqsrINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.9167
20200
ckim-vqsrINDELD16_PLUSmap_l125_m1_e0*
96.4286
100.0000
93.1034
97.3098
2702720
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m1_e0het
97.5610
100.0000
95.2381
97.4699
2002010
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
91.6667
30300
ckim-vqsrINDELD16_PLUSmap_l125_m1_e0homalt
88.8889
100.0000
80.0000
97.6415
40410
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e0*
96.4286
100.0000
93.1034
97.7147
2702720
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e0het
97.5610
100.0000
95.2381
97.8615
2002010
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
92.1053
30300
ckim-vqsrINDELD16_PLUSmap_l125_m2_e0homalt
88.8889
100.0000
80.0000
97.9920
40410
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e1*
94.7368
96.4286
93.1034
97.7658
2712720
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e1het
97.5610
100.0000
95.2381
97.9084
2002010
0.0000
ckim-vqsrINDELD16_PLUSmap_l125_m2_e1hetalt
85.7143
75.0000
100.0000
92.1053
31300
ckim-vqsrINDELD16_PLUSmap_l125_m2_e1homalt
88.8889
100.0000
80.0000
98.0469
40410
0.0000
ckim-vqsrINDELD16_PLUSmap_l150_m0_e0*
93.3333
100.0000
87.5000
98.0723
70710
0.0000
ckim-vqsrINDELD16_PLUSmap_l150_m0_e0het
93.3333
100.0000
87.5000
97.5758
70710
0.0000
ckim-vqsrINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000