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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
23551-23600 / 86044 show all
ckim-vqsrINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD16_PLUS**
97.9266
97.9363
97.9170
71.5505
66441406628141105
74.4681
ckim-vqsrINDELD16_PLUS*het
97.9651
99.2719
96.6923
79.4267
31362328949969
69.6970
ckim-vqsrINDELD16_PLUS*hetalt
96.6957
94.2059
99.3207
38.1824
182111220471414
100.0000
ckim-vqsrINDELD16_PLUS*homalt
99.0314
99.7045
98.3673
70.9863
1687516872822
78.5714
ckim-vqsrINDELD16_PLUSHG002complexvar*
97.6423
97.5046
97.7805
66.9855
16024115863628
77.7778
ckim-vqsrINDELD16_PLUSHG002complexvarhet
98.3872
98.7353
98.0415
69.0000
1093148511710
58.8235
ckim-vqsrINDELD16_PLUSHG002complexvarhetalt
93.2896
89.8785
96.9697
47.4403
222254481414
100.0000
ckim-vqsrINDELD16_PLUSHG002complexvarhomalt
98.7952
99.3080
98.2877
76.3371
287228754
80.0000
ckim-vqsrINDELD16_PLUSHG002compoundhet*
95.5217
95.2157
95.8298
35.3889
222911222299795
97.9381
ckim-vqsrINDELD16_PLUSHG002compoundhethet
88.8043
99.2593
80.3419
59.7015
40232826967
97.1014
ckim-vqsrINDELD16_PLUSHG002compoundhethetalt
96.8969
94.3465
99.5891
25.8850
1819109193988
100.0000
ckim-vqsrINDELD16_PLUSHG002compoundhethomalt
44.4444
100.0000
28.5714
72.5490
8082020
100.0000
ckim-vqsrINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.5807
60600
ckim-vqsrINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6572
40400
ckim-vqsrINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.1304
20200
ckim-vqsrINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
83.3333
1201200
ckim-vqsrINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
85.4545
80800
ckim-vqsrINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
76.4706
40400
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
95.6964
95.4417
95.9524
73.2314
20319720158577
90.5882
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
93.5214
97.8947
89.5221
87.3282
651144875750
87.7193
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
95.2725
91.6923
99.1437
39.7362
89481104299
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
97.8852
99.5902
96.2376
72.0686
48624861918
94.7368
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
75.0000
75.0000
75.0000
99.5526
31310
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8487
10100
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
50.0000
50.0000
50.0000
99.1111
11110
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
98.3708
98.3432
98.3984
72.3852
35025935025745
78.9474
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.1537
99.4096
96.9291
83.2983
1347812313930
76.9231
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.8234
96.2133
99.4883
36.4312
124549136177
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.2908
99.7807
98.8056
70.5939
9102910118
72.7273
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.2658
97.2995
97.2323
75.7006
48641354848138105
76.0870
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
96.5189
98.9555
94.1994
86.2906
18001915599669
71.8750
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.7195
94.2517
99.3201
38.1124
182011120451414
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.6910
99.5997
97.7987
75.1563
1244512442822
78.5714
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.3095
98.4375
98.1818
86.2989
378637872
28.5714
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.2480
97.5124
96.9849
88.9751
196519361
16.6667
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
83.1169
1011300
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.7101
100.0000
99.4220
81.3578
172017211
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
75.0000
75.0000
75.0000
99.5418
31310
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8445
10100
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
50.0000
50.0000
50.0000
99.1071
11110
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.5140
99.3932
99.6350
71.6258
819581931
33.3333
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.4340
99.0991
99.7712
76.2758
440443610
0.0000
ckim-vqsrINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.2973
94.7368
100.0000
70.6667
1812200