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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 462 463 464 465 466 467 468 469 470 ... 1720 1721 » 23251-23300 / 86044 show all
ckim-vqsr	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-vqsr	INDEL	I16_PLUS	*	*	97.2630	96.1267	98.4265	70.8795	6130	247	6130	98	83	84.6939
ckim-vqsr	INDEL	I16_PLUS	*	het	98.1949	97.2774	99.1298	76.5400	2644	74	2620	23	10	43.4783
ckim-vqsr	INDEL	I16_PLUS	*	hetalt	95.6650	91.9924	99.6430	54.9403	1930	168	1954	7	6	85.7143
ckim-vqsr	INDEL	I16_PLUS	*	homalt	97.7080	99.6797	95.8128	71.8495	1556	5	1556	68	67	98.5294
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	*	98.2632	97.2498	99.2980	66.9502	1273	36	1273	9	9	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	het	98.7823	97.5940	100.0000	64.8679	649	16	625	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	hetalt	96.6468	94.0299	99.4135	66.8932	315	20	339	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	homalt	98.8800	100.0000	97.7848	70.4673	309	0	309	7	7	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	*	94.1794	92.1139	96.3397	52.0365	1974	169	1974	75	75	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	het	85.1501	95.7447	76.6667	93.8017	45	2	23	7	7	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.7976	92.0210	99.8974	44.8061	1926	167	1948	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	homalt	8.3333	100.0000	4.3478	72.9412	3	0	3	66	66	100.0000
ckim-vqsr	INDEL	I16_PLUS	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	77.5510	11	1	11	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.9394	90.2913	97.8947	88.4988	186	20	186	4	2	50.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.8838	90.5263	97.5000	91.3886	86	9	78	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.1538	100.0000	92.5926	92.7224	25	0	25	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.2919	94.3909	98.2712	79.8126	1077	64	1080	19	17	89.4737
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	96.4656	94.7248	98.2716	85.9667	413	23	398	7	5	71.4286
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2821	93.1389	99.6448	63.2266	543	40	561	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	95.6522	99.1803	92.3664	87.2444	121	1	121	10	10	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	96.5454	94.9673	98.1769	85.0222	1453	77	1454	27	18	66.6667
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	96.6974	95.4955	97.9299	88.5024	636	30	615	13	5	38.4615
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.3190	93.1715	99.6865	67.9236	614	45	636	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.6667	99.0244	94.4186	91.1777	203	2	203	12	11	91.6667
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	95.7346	93.5185	98.0583	89.8322	101	7	101	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	93.6995	90.9091	96.6667	89.9833	60	6	58	2	0	0.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	97.1429	94.4444	100.0000	83.4783	17	1	19	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	91.9732	24	0	24	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	98.2857	96.6292	100.0000	81.5451	172	6	172	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	98.1132	96.2963	100.0000	81.5552	104	4	102	0	0

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