PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
23151-23200 / 86044 show all
ckim-vqsrINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
98.0583
21200
ckim-vqsrINDELI6_15map_l250_m2_e1*
85.7143
75.0000
100.0000
98.6928
62600
ckim-vqsrINDELI6_15map_l250_m2_e1het
88.8889
80.0000
100.0000
98.7952
41400
ckim-vqsrINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
98.1308
21200
ckim-vqsrINDELI6_15map_siren*
97.5042
96.0656
98.9865
86.0902
2931229331
33.3333
ckim-vqsrINDELI6_15map_sirenhet
96.7742
94.4056
99.2647
88.7696
135813510
0.0000
ckim-vqsrINDELI6_15map_sirenhetalt
97.8723
95.8333
100.0000
76.6892
6936900
ckim-vqsrINDELI6_15map_sirenhomalt
98.3425
98.8889
97.8022
85.3462
8918921
50.0000
ckim-vqsrINDELI6_15segdup*
98.5591
97.7143
99.4186
93.9373
171417110
0.0000
ckim-vqsrINDELI6_15segduphet
98.1818
97.5904
98.7805
95.4267
8128110
0.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
99.5654
99.3064
99.8258
36.8073
171812171933
100.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
99.6436
99.4310
99.8571
47.4080
699469911
100.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3971
98.8014
100.0000
18.5915
577757800
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.6618
99.7743
99.5495
35.0877
442144222
100.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
97.5038
96.4789
98.5507
45.6693
137513621
50.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
93.7037
95.8333
91.6667
76.2376
2312221
50.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
22.5000
9349300
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
ckim-vqsrINDELD6_15map_l100_m0_e0*
95.6938
97.0874
94.3396
91.8147
100310061
16.6667
ckim-vqsrINDELD6_15map_l100_m0_e0het
94.4000
98.3333
90.7692
93.0851
5915961
16.6667
ckim-vqsrINDELD6_15map_l100_m0_e0hetalt
97.2973
94.7368
100.0000
83.3333
1811800
ckim-vqsrINDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
90.6883
2312300
ckim-vqsrINDELD6_15map_l100_m1_e0*
96.1089
95.7364
96.4844
89.2797
2471124792
22.2222
ckim-vqsrINDELD6_15map_l100_m1_e0het
94.9416
96.8254
93.1298
92.1557
122412292
22.2222
ckim-vqsrINDELD6_15map_l100_m1_e0hetalt
96.1832
92.6471
100.0000
73.9669
6356300
ckim-vqsrINDELD6_15map_l100_m1_e0homalt
98.4127
96.8750
100.0000
86.9748
6226200
ckim-vqsrINDELD6_15map_l100_m2_e0*
96.0000
95.4545
96.5517
89.8325
2521225292
22.2222
ckim-vqsrINDELD6_15map_l100_m2_e0het
94.7368
96.1832
93.3333
92.5456
126512692
22.2222
ckim-vqsrINDELD6_15map_l100_m2_e0hetalt
96.1832
92.6471
100.0000
75.2941
6356300
ckim-vqsrINDELD6_15map_l100_m2_e0homalt
98.4375
96.9231
100.0000
87.4251
6326300
ckim-vqsrINDELD6_15map_l100_m2_e1*
95.9707
95.2727
96.6790
89.6919
2621326292
22.2222
ckim-vqsrINDELD6_15map_l100_m2_e1het
94.8905
96.2963
93.5252
92.4743
130513092
22.2222
ckim-vqsrINDELD6_15map_l100_m2_e1hetalt
95.7143
91.7808
100.0000
75.0929
6766700
ckim-vqsrINDELD6_15map_l100_m2_e1homalt
98.4848
97.0149
100.0000
87.3294
6526500
ckim-vqsrINDELD6_15map_l125_m0_e0*
96.8421
97.8723
95.8333
94.9045
4614620
0.0000
ckim-vqsrINDELD6_15map_l125_m0_e0het
94.9153
96.5517
93.3333
95.7204
2812820
0.0000
ckim-vqsrINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
60600
ckim-vqsrINDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
93.1429
1201200
ckim-vqsrINDELD6_15map_l125_m1_e0*
96.1373
95.7265
96.5517
92.8129
112511241
25.0000
ckim-vqsrINDELD6_15map_l125_m1_e0het
94.5736
95.3125
93.8462
94.4254
6136141
25.0000
ckim-vqsrINDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
86.2595
1811800
ckim-vqsrINDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
89.5899
3313300
ckim-vqsrINDELD6_15map_l125_m2_e0*
96.0000
95.2381
96.7742
93.0726
120612041
25.0000
ckim-vqsrINDELD6_15map_l125_m2_e0het
94.3662
94.3662
94.3662
94.5636
6746741
25.0000