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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 440 441 442 443 444 445 446 447 448 ... 1720 1721 » 22151-22200 / 86044 show all
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	82.8484	78.1915	88.0952	60.0000	147	41	148	20	19	95.0000
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	83.6123	74.0570	95.9987	49.9006	2886	1011	2903	121	83	68.5950
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	84.3015	79.4055	89.8409	68.3211	748	194	734	83	52	62.6506
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	83.0301	71.4070	99.1727	30.3565	1888	756	1918	16	11	68.7500
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	85.7762	80.3859	91.9414	59.8529	250	61	251	22	20	90.9091
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	82.0986	72.9041	93.9468	53.8786	4609	1713	4625	298	190	63.7584
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	81.8319	77.0675	87.2242	66.9862	1519	452	1502	220	128	58.1818
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	81.7466	69.7674	98.6920	34.2284	2460	1066	2490	33	24	72.7273
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	84.0119	76.3636	93.3628	58.1998	630	195	633	45	38	84.4444
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	83.2650	74.7927	93.9018	56.7791	1804	608	1817	118	62	52.5424
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	83.1362	81.1475	85.2248	77.0629	396	92	398	69	22	31.8841
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	83.6839	72.6708	98.6312	33.2487	1287	484	1297	18	13	72.2222
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	79.4104	79.0850	79.7386	67.5159	121	32	122	31	27	87.0968
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	*	52.8000	35.8696	100.0000	62.5000	33	59	33	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	het		55.5556		100.0000	5	4	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	50.4505	33.7349	100.0000	36.5385	28	55	33	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	84.9618	80.0000	90.5797	79.6460	124	31	125	13	2	15.3846
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	82.9268	82.2581	83.6066	84.9383	51	11	51	10	2	20.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	87.5304	79.5455	97.2973	66.0550	35	9	36	1	0	0.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	85.3933	77.5510	95.0000	75.6098	38	11	38	2	0	0.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	83.8622	76.0787	93.4198	53.8889	1005	316	1008	71	48	67.6056
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	82.4178	78.4483	86.8106	63.9896	364	100	362	55	35	63.6364
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	83.6943	72.8549	98.3229	36.6534	467	174	469	8	6	75.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	87.4670	80.5556	95.6757	56.8765	174	42	177	8	7	87.5000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	63.0114	46.2366	98.8889	64.0000	86	100	89	1	1	100.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	70.8861	57.1429	93.3333	87.7049	20	15	14	1	1	100.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	60.8295	43.7086	100.0000	34.7826	66	85	75	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	87.3247	79.9043	96.2644	43.3225	334	84	335	13	7	53.8462
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	het	84.9868	78.6885	92.3810	59.6154	96	26	97	8	3	37.5000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	88.8394	80.5907	98.9691	22.4000	191	46	192	2	1	50.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	86.1870	79.6610	93.8776	52.8846	47	12	46	3	3	100.0000
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	*	70.0000	53.8462	100.0000	53.3333	7	6	7	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	het		100.0000		100.0000	1	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	66.6667	50.0000	100.0000	12.5000	6	6	7	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	map_l100_m0_e0	*	53.3333	36.3636	100.0000	94.2857	12	21	12	0	0
ckim-isaac	INDEL	I6_15	map_l100_m0_e0	het	58.3333	41.1765	100.0000	96.3636	7	10	6	0	0
ckim-isaac	INDEL	I6_15	map_l100_m0_e0	hetalt	85.7143	75.0000	100.0000	80.9524	3	1	4	0	0
ckim-isaac	INDEL	I6_15	map_l100_m0_e0	homalt	28.5714	16.6667	100.0000	91.6667	2	10	2	0	0
ckim-isaac	INDEL	I6_15	map_l100_m1_e0	*	55.3459	38.5965	97.7778	90.5462	44	70	44	1	1	100.0000

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