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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
20001-20050 / 86044 show all
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
99.0364
98.8318
99.2419
76.8770
63457562844825
52.0833
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.1713
92.6560
99.9638
35.0529
5463433552522
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.0984
99.3619
98.8363
71.4448
37372437374444
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.5100
96.3492
98.6992
65.8143
6072360785
62.5000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.2507
97.3988
99.1176
69.7509
337933730
0.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.6129
84.5238
100.0000
53.8961
71137100
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.5149
99.5000
97.5490
60.8445
199119955
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8621
10100
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.8333
10100
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.4113
99.1196
99.7048
77.3525
135112135142
50.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.6764
99.6119
99.7409
78.6563
770377020
0.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.8140
91.9643
100.0000
71.9346
103910300
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7912
100.0000
99.5833
75.9880
478047822
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.6855
99.5812
99.7901
80.3667
951495121
50.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8179
99.8179
99.8179
81.1664
548154810
0.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
78.8104
5735700
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8557
100.0000
99.7118
79.2216
346034611
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
92.7900
88.6228
97.3684
64.6649
8881148882421
87.5000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
95.9933
95.8333
96.1538
80.5097
27612250107
70.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.5952
84.4937
100.0000
35.0348
5349856000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
89.6552
95.1220
84.7826
76.1039
784781414
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
96.8875
94.6157
99.2711
52.0847
653737265374843
89.5833
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
98.7393
98.6981
98.7805
73.6869
15922115391914
73.6842
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.1468
92.6189
99.9541
23.6736
4304343435722
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.3424
98.7673
95.9581
68.3562
64186412727
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.5576
95.6170
99.5787
50.2750
567226056722422
91.6667
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
99.3173
99.3243
99.3103
72.7614
13239129697
77.7778
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.8132
93.8694
99.9475
22.1609
3782247380922
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.5230
99.2995
97.7586
67.1946
56745671313
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.2264
95.2551
99.2811
61.5901
801039980105849
84.4828
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
98.8899
98.7393
99.0409
76.8376
24283123752314
60.8696
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.0708
92.4769
99.9552
27.1601
4413359446622
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.2353
99.2360
97.2546
73.3953
1169911693333
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
98.0263
96.6909
99.3990
68.1693
15545532155469471
75.5319
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.0364
98.8318
99.2419
76.8770
63457562844825
52.0833
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.1713
92.6560
99.9638
35.0529
5463433552522
100.0000
ckim-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.0984
99.3619
98.8363
71.4448
37372437374444
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
97.3823
95.0803
99.7986
57.9620
54502825451119
81.8182
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
99.4085
99.1930
99.6249
78.2367
135211132853
60.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.2944
92.8778
99.9719
25.4138
3534271355911
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.5587
100.0000
99.1213
72.8401
564056455
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
78.7206
65.5340
98.5507
56.6038
1357113621
50.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
81.3559
88.8889
75.0000
96.7742
243310
0.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
76.3320
62.0112
99.2537
24.2938
1116813311
100.0000