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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
19451-19500 / 86044 show all
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.1889
97.3395
97.0388
75.6563
48661334850148106
71.6216
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
96.2770
99.0654
93.6413
86.2049
180217156110670
66.0377
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.7195
94.2517
99.3201
38.1124
182011120451414
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.6910
99.5997
97.7987
75.1563
1244512442822
78.5714
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.9275
98.4375
97.4227
86.2069
3786378102
20.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
96.5185
97.5124
95.5446
88.8274
196519391
11.1111
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
83.1169
1011300
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.7101
100.0000
99.4220
81.3578
172017211
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
75.0000
75.0000
75.0000
99.5418
31310
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8445
10100
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
50.0000
50.0000
50.0000
99.1071
11110
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.2727
99.3932
99.1525
71.5271
819581971
14.2857
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
98.9825
99.0991
98.8662
76.1105
440443650
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.2973
94.7368
100.0000
70.6667
1812200
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7238
100.0000
99.4490
62.9592
361036121
50.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.5943
99.5943
99.5943
58.4317
491249120
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.6282
99.6296
99.6269
64.6904
269126710
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.6522
91.6667
100.0000
48.0000
1111300
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7636
100.0000
99.5283
47.2637
211021110
0.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
94.8006
94.5372
95.0655
64.2896
12467212336461
95.3125
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
91.2606
98.3425
85.1301
84.5313
35662294038
95.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
94.7052
90.8178
98.9404
37.4482
6336474788
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
96.6165
99.2278
94.1392
60.2041
25722571615
93.7500
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
96.7654
96.6355
96.8956
63.2180
310210830909994
94.9495
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
94.8557
99.0868
90.9713
82.4616
86886656662
93.9394
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.5196
93.9394
99.2455
33.2429
15199817101313
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.4848
99.7211
97.2789
61.7387
71527152019
95.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
98.0078
97.9824
98.0331
65.1766
18943918943836
94.7368
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
96.7712
99.6205
94.0803
83.0466
52524452826
92.8571
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.8135
96.1864
99.4965
31.6116
9083698855
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.3534
99.7835
98.9270
64.3185
461146155
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.1046
97.0494
97.1598
70.1203
3947120393411599
86.0870
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.1031
98.9474
93.4177
83.9735
13161411077865
83.3333
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.4603
93.8144
99.2597
35.4174
154710217431313
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.7250
99.6324
97.8339
67.7720
1084410842421
87.5000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.1889
97.3395
97.0388
75.6563
48661334850148106
71.6216
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.2770
99.0654
93.6413
86.2049
180217156110670
66.0377
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.7195
94.2517
99.3201
38.1124
182011120451414
100.0000
ckim-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.6910
99.5997
97.7987
75.1563
1244512442822
78.5714
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
97.8001
97.9911
97.6098
69.6269
17563617564331
72.0930
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
96.8208
99.5074
94.2755
84.0377
60635273222
68.7500
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
97.7528
96.0459
99.5215
32.8514
7533183244
100.0000
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
98.8792
99.4987
98.2673
65.6463
397239775
71.4286
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
92.5881
92.5170
92.6593
58.2176
680556695351
96.2264
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
78.6885
100.0000
64.8649
84.2999
1690723938
97.4359