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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
19401-19450 / 86044 show all
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
94.4079
91.7293
97.2477
87.7940
1221110633
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
94.9615
90.9091
99.3921
56.0160
3103132722
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
86.7925
100.0000
76.6667
88.7218
2302377
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
94.6645
92.0290
97.4555
73.3740
381333831010
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
93.9997
91.5094
96.6292
86.9883
9798633
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
95.2891
91.6084
99.2780
52.0761
2622427522
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
89.7959
100.0000
81.4815
87.3832
2202255
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
95.3747
93.0131
97.8593
82.1067
639486401412
85.7143
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.1978
94.7154
97.7273
88.5833
2331321553
60.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
94.9242
90.7895
99.4536
60.9392
3453536422
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
94.5736
100.0000
89.7059
91.4033
6106177
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.8901
95.6863
98.1246
84.9192
14646614652818
64.2857
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.4013
96.9970
97.8091
88.3245
64620625145
35.7143
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.4002
93.3232
99.6870
67.8894
6154463722
100.0000
ckim-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
96.6667
99.0244
94.4186
91.1777
20322031211
91.6667
ckim-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
94.7735
92.5000
97.1616
81.7457
444364451312
92.3077
ckim-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
95.0949
93.7500
96.4789
89.8208
1501013754
80.0000
ckim-gatkINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD16_PLUS**
97.7762
97.9953
97.5581
71.4634
66481366632166106
63.8554
ckim-gatkINDELD16_PLUS*het
97.6163
99.3985
95.8968
79.2687
314019289812470
56.4516
ckim-gatkINDELD16_PLUS*hetalt
96.6957
94.2059
99.3207
38.1824
182111220471414
100.0000
ckim-gatkINDELD16_PLUS*homalt
99.0314
99.7045
98.3673
70.9863
1687516872822
78.5714
ckim-gatkINDELD16_PLUSHG002complexvar*
97.6146
97.6263
97.6030
66.9174
16043915883928
71.7949
ckim-gatkINDELD16_PLUSHG002complexvarhet
98.3088
98.9160
97.7090
68.8770
1095128532010
50.0000
ckim-gatkINDELD16_PLUSHG002complexvarhetalt
93.2896
89.8785
96.9697
47.4403
222254481414
100.0000
ckim-gatkINDELD16_PLUSHG002complexvarhomalt
98.7952
99.3080
98.2877
76.3371
287228754
80.0000
ckim-gatkINDELD16_PLUSHG002compoundhet*
95.5256
95.3012
95.7511
35.3496
223111022319996
96.9697
ckim-gatkINDELD16_PLUSHG002compoundhethet
88.7912
99.7531
80.0000
59.4286
40412847168
95.7746
ckim-gatkINDELD16_PLUSHG002compoundhethetalt
96.8969
94.3465
99.5891
25.8850
1819109193988
100.0000
ckim-gatkINDELD16_PLUSHG002compoundhethomalt
44.4444
100.0000
28.5714
72.5490
8082020
100.0000
ckim-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.5807
60600
ckim-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6572
40400
ckim-gatkINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
ckim-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.1304
20200
ckim-gatkINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
83.3333
1201200
ckim-gatkINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
85.4545
80800
ckim-gatkINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
76.4706
40400
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
95.6301
95.4887
95.7720
73.1847
20329620168978
87.6404
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
93.2428
98.0451
88.8889
87.2266
652134886151
83.6066
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
95.2725
91.6923
99.1437
39.7362
89481104299
100.0000
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
97.8852
99.5902
96.2376
72.0686
48624861918
94.7368
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
75.0000
75.0000
75.0000
99.5526
31310
0.0000
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8487
10100
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
50.0000
50.0000
50.0000
99.1111
11110
0.0000
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
98.2889
98.3993
98.1788
72.3290
35045735046545
69.2308
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
97.9160
99.5572
96.3281
83.1889
1349612334730
63.8298
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.8234
96.2133
99.4883
36.4312
124549136177
100.0000
ckim-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.2908
99.7807
98.8056
70.5939
9102910118
72.7273