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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
19151-19200 / 86044 show all
ckim-gatkINDELD6_15*homalt
98.8810
99.8735
97.9079
55.6525
631886318135132
97.7778
ckim-gatkINDELD6_15HG002complexvar*
98.1151
97.6990
98.5347
58.5306
518012251787770
90.9091
ckim-gatkINDELD6_15HG002complexvarhet
99.0142
98.9423
99.0862
59.4709
30873330362822
78.5714
ckim-gatkINDELD6_15HG002complexvarhetalt
93.7593
91.3129
96.3403
47.3985
925889743737
100.0000
ckim-gatkINDELD6_15HG002complexvarhomalt
99.4466
99.9145
98.9831
63.0094
1168111681211
91.6667
ckim-gatkINDELD6_15HG002compoundhet*
95.5310
94.8178
96.2551
36.1757
85634688559333330
99.0991
ckim-gatkINDELD6_15HG002compoundhethet
90.0227
98.3645
82.9851
68.6916
84214834171169
98.8304
ckim-gatkINDELD6_15HG002compoundhethetalt
96.9335
94.4301
99.5733
24.1244
769745477013333
100.0000
ckim-gatkINDELD6_15HG002compoundhethomalt
27.1186
100.0000
15.6863
71.0775
24024129128
99.2248
ckim-gatkINDELD6_15decoy*
66.6667
100.0000
50.0000
99.9108
10110
0.0000
ckim-gatkINDELD6_15decoyhet
0.0000
0.0000
99.9461
00010
0.0000
ckim-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.2647
10100
ckim-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
ckim-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
56.5657
4304300
ckim-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
53.9683
2902900
ckim-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
ckim-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
ckim-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.7734
92.6190
94.9569
54.7101
36392903634193182
94.3005
ckim-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
93.1591
97.0864
89.5372
74.7588
9332889010494
90.3846
ckim-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.9827
89.0533
99.4898
29.9773
210725921451111
100.0000
ckim-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
93.6669
99.5017
88.4786
52.7565
59935997877
98.7179
ckim-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1831
60600
ckim-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8873
30300
ckim-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
ckim-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.0769
10100
ckim-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
98.3167
98.0869
98.5475
60.4971
1574030715741232216
93.1034
ckim-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.6238
99.4640
97.7977
72.6194
5567305551125111
88.8000
ckim-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.7140
95.9777
99.5142
33.0521
653827465553232
100.0000
ckim-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.9385
99.9175
97.9784
62.3961
3635336357573
97.3333
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.5160
97.0969
97.9388
58.0884
1715851317153361342
94.7368
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.9393
99.0763
96.8281
71.9883
5792545739188172
91.4894
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.8615
94.3541
99.5059
29.2939
760445576523838
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.1861
99.8938
96.5358
60.0431
376243762135132
97.7778
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.3494
96.6507
98.0583
77.4370
202720243
75.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.2332
96.8504
97.6190
80.0633
123412332
66.6667
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
56.6265
3633600
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8506
100.0000
97.7273
77.7778
4304311
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8723
40400
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.4252
20200
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.5517
99.4030
99.7009
66.4548
9996100032
66.6667
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.7394
99.6528
99.8261
70.1454
574257411
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.3442
92.7273
98.1132
61.5942
5145211
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8665
100.0000
99.7333
59.5032
374037410
0.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.5944
99.5365
99.6524
64.2502
859486032
66.6667
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8974
100.0000
99.7951
68.0419
487048711
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
92.1122
87.8788
96.7742
62.1951
2943011
100.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8544
100.0000
99.7093
57.2671
343034310
0.0000
ckim-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.1008
91.8360
94.4009
50.5628
25312252529150146
97.3333