PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
19051-19100 / 86044 show all
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.9318
99.9727
99.8910
51.2943
36651366544
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
98.1189
97.4026
98.8458
61.2336
12003211991412
85.7143
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
97.8944
97.9221
97.8667
79.2359
377836787
87.5000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.8966
96.4615
99.3750
22.2357
6272363644
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
99.2405
99.4924
98.9899
60.4000
196119621
50.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
99.8282
99.7547
99.9018
44.2986
406710407041
25.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
99.8250
99.7812
99.8688
48.0455
22805228330
0.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3478
98.9177
99.7817
27.8740
457545711
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6411
13300133000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
96.6443
96.0000
97.2973
64.5933
7237221
50.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
96.2963
100.0000
92.8571
87.5000
1301310
0.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
96.8421
93.8776
100.0000
25.8065
4634600
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
96.2963
100.0000
92.8571
60.0000
1301311
100.0000
ckim-gatkINDELD1_5map_l100_m0_e0*
95.3440
98.3778
92.4918
89.2439
84914850695
7.2464
ckim-gatkINDELD1_5map_l100_m0_e0het
94.1262
98.8156
89.8618
90.2908
5847585663
4.5455
ckim-gatkINDELD1_5map_l100_m0_e0hetalt
78.2609
64.2857
100.0000
95.5224
95900
ckim-gatkINDELD1_5map_l100_m0_e0homalt
99.0329
99.2248
98.8417
84.1880
256225632
66.6667
ckim-gatkINDELD1_5map_l100_m1_e0*
96.9768
98.8095
95.2108
87.6725
1826221829928
8.6957
ckim-gatkINDELD1_5map_l100_m1_e0het
96.0438
99.1729
93.1061
88.7944
1199101202896
6.7416
ckim-gatkINDELD1_5map_l100_m1_e0hetalt
91.9540
85.1064
100.0000
91.5789
4074000
ckim-gatkINDELD1_5map_l100_m1_e0homalt
99.3232
99.1554
99.4915
83.5517
587558732
66.6667
ckim-gatkINDELD1_5map_l100_m2_e0*
97.0041
98.7467
95.3219
88.2074
1891241895938
8.6022
ckim-gatkINDELD1_5map_l100_m2_e0het
96.1099
99.1242
93.2735
89.2977
1245111248906
6.6667
ckim-gatkINDELD1_5map_l100_m2_e0hetalt
90.9091
83.3333
100.0000
91.9922
4084100
ckim-gatkINDELD1_5map_l100_m2_e0homalt
99.3443
99.1817
99.5074
84.1571
606560632
66.6667
ckim-gatkINDELD1_5map_l100_m2_e1*
97.0144
98.7107
95.3754
88.2617
1914251918938
8.6022
ckim-gatkINDELD1_5map_l100_m2_e1het
96.1455
99.1325
93.3333
89.3667
1257111260906
6.6667
ckim-gatkINDELD1_5map_l100_m2_e1hetalt
90.3226
82.3529
100.0000
91.7939
4294300
ckim-gatkINDELD1_5map_l100_m2_e1homalt
99.3538
99.1935
99.5146
84.2025
615561532
66.6667
ckim-gatkINDELD1_5map_l125_m0_e0*
94.8781
98.7903
91.2639
91.8584
4906491473
6.3830
ckim-gatkINDELD1_5map_l125_m0_e0het
93.3136
98.8406
88.3721
92.6760
3414342451
2.2222
ckim-gatkINDELD1_5map_l125_m0_e0hetalt
80.0000
66.6667
100.0000
98.5185
21200
ckim-gatkINDELD1_5map_l125_m0_e0homalt
98.9899
99.3243
98.6577
87.4685
147114722
100.0000
ckim-gatkINDELD1_5map_l125_m1_e0*
96.0274
98.7132
93.4839
90.1867
1074141076756
8.0000
ckim-gatkINDELD1_5map_l125_m1_e0het
94.7425
99.0358
90.8060
91.1611
7197721734
5.4795
ckim-gatkINDELD1_5map_l125_m1_e0hetalt
81.8182
69.2308
100.0000
96.9900
94900
ckim-gatkINDELD1_5map_l125_m1_e0homalt
99.2826
99.1404
99.4253
85.7785
346334622
100.0000
ckim-gatkINDELD1_5map_l125_m2_e0*
96.1316
98.7752
93.6258
90.6812
1129141131776
7.7922
ckim-gatkINDELD1_5map_l125_m2_e0het
94.8739
99.0838
91.0072
91.6037
7577759754
5.3333
ckim-gatkINDELD1_5map_l125_m2_e0hetalt
84.6154
73.3333
100.0000
96.8023
1141100
ckim-gatkINDELD1_5map_l125_m2_e0homalt
99.3122
99.1758
99.4490
86.4855
361336122
100.0000
ckim-gatkINDELD1_5map_l125_m2_e1*
96.1771
98.7900
93.6989
90.7298
1143141145776
7.7922
ckim-gatkINDELD1_5map_l125_m2_e1het
94.9121
99.0909
91.0714
91.6749
7637765754
5.3333
ckim-gatkINDELD1_5map_l125_m2_e1hetalt
84.6154
73.3333
100.0000
96.8750
1141100
ckim-gatkINDELD1_5map_l125_m2_e1homalt
99.3271
99.1935
99.4609
86.4599
369336922
100.0000
ckim-gatkINDELD1_5map_l150_m0_e0*
93.6362
98.9619
88.8545
93.9851
2863287361
2.7778