PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
18551-18600 / 86044 show all
ckim-gatkSNP*map_l250_m1_e0*
69.0461
53.5724
97.0891
96.1568
3869335338691169
7.7586
ckim-gatkSNP*map_l250_m1_e0het
72.2025
57.8759
95.9554
96.7153
2752200327521169
7.7586
ckim-gatkSNP*map_l250_m1_e0hetalt
0.0000
100.0000
04000
ckim-gatkSNP*map_l250_m1_e0homalt
62.4022
45.3512
100.0000
93.1367
11171346111700
ckim-gatkSNP*map_l250_m2_e0*
70.6281
55.4724
97.1784
96.2246
43743511437412710
7.8740
ckim-gatkSNP*map_l250_m2_e0het
73.8651
59.9923
96.0839
96.7509
31162078311612710
7.8740
ckim-gatkSNP*map_l250_m2_e0hetalt
33.3333
20.0000
100.0000
99.2366
14100
ckim-gatkSNP*map_l250_m2_e0homalt
63.7586
46.7982
100.0000
93.4789
12571429125700
ckim-gatkSNP*map_l250_m2_e1*
70.8260
55.7155
97.1828
96.2381
44503537445012910
7.7519
ckim-gatkSNP*map_l250_m2_e1het
74.0542
60.2394
96.0909
96.7655
31712093317112910
7.7519
ckim-gatkSNP*map_l250_m2_e1hetalt
33.3333
20.0000
100.0000
99.2366
14100
ckim-gatkSNP*map_l250_m2_e1homalt
63.9640
47.0199
100.0000
93.4676
12781440127800
ckim-gatkSNP*map_siren*
94.1020
89.7981
98.8391
66.9681
131310149181312871542125
8.1064
ckim-gatkSNP*map_sirenhet
95.8468
93.5653
98.2423
71.0090
851365855851221523109
7.1569
ckim-gatkSNP*map_sirenhetalt
87.2483
80.2469
95.5882
82.7848
65166532
66.6667
ckim-gatkSNP*map_sirenhomalt
91.0516
83.5974
99.9653
55.1658
461099047461001614
87.5000
ckim-gatkSNP*segdup*
98.8880
99.3409
98.4392
93.5811
278821852787644214
3.1674
ckim-gatkSNP*segduphet
98.5246
99.5207
97.5483
94.9213
1723483172284335
1.1547
ckim-gatkSNP*segduphetalt
100.0000
100.0000
100.0000
98.3982
70700
ckim-gatkSNP*segduphomalt
99.4811
99.0505
99.9155
88.5459
106411021064199
100.0000
ckim-gatkSNP*segdupwithalt*
0.0000
100.0000
00000
ckim-gatkSNP*segdupwithalthet
0.0000
100.0000
00000
ckim-gatkSNP*segdupwithalthetalt
0.0000
100.0000
00000
ckim-gatkSNP*segdupwithalthomalt
0.0000
100.0000
00000
ckim-gatkSNP*tech_badpromoters*
98.4026
98.0892
98.7179
49.0196
154315422
100.0000
ckim-gatkSNP*tech_badpromotershet
98.6842
97.4026
100.0000
50.9804
7527500
ckim-gatkSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ckim-gatkSNP*tech_badpromotershomalt
98.1366
98.7500
97.5309
47.0588
7917922
100.0000
ckim-gatkSNPti**
99.6817
99.5154
99.8485
21.6609
20754041010720753453148170
5.4003
ckim-gatkSNPti*het
99.7182
99.6780
99.7585
24.7182
1277763412812777133093133
4.3000
ckim-gatkSNPti*hetalt
98.5281
97.7663
99.3019
52.5269
5691356944
100.0000
ckim-gatkSNPti*homalt
99.6240
99.2571
99.9936
16.1503
79707259667970635133
64.7059
ckim-gatkSNPtiHG002complexvar*
99.5943
99.2243
99.9671
17.9110
504492394450443216674
44.5783
ckim-gatkSNPtiHG002complexvarhet
99.7549
99.5549
99.9557
17.5388
313365140131331513950
35.9712
ckim-gatkSNPtiHG002complexvarhetalt
97.5369
95.6522
99.4975
39.5137
198919811
100.0000
ckim-gatkSNPtiHG002complexvarhomalt
99.3341
98.6902
99.9864
18.4846
19092925341909192623
88.4615
ckim-gatkSNPtiHG002compoundhet*
99.4312
99.0159
99.8500
36.2044
17306172173062621
80.7692
ckim-gatkSNPtiHG002compoundhethet
99.4351
99.0847
99.7881
40.5181
94188794182015
75.0000
ckim-gatkSNPtiHG002compoundhethetalt
98.8646
97.7547
100.0000
22.2527
5661356600
ckim-gatkSNPtiHG002compoundhethomalt
99.4702
99.0262
99.9181
30.6914
732272732266
100.0000
ckim-gatkSNPtidecoy*
0.0000
100.0000
00000
ckim-gatkSNPtidecoyhet
0.0000
100.0000
00000
ckim-gatkSNPtidecoyhetalt
0.0000
100.0000
00000
ckim-gatkSNPtidecoyhomalt
0.0000
100.0000
00000
ckim-gatkSNPtifunc_cds*
99.6887
99.8912
99.4870
29.0714
137721513770711
1.4085
ckim-gatkSNPtifunc_cdshet
99.5548
99.9412
99.1713
33.6071
849958497711
1.4085
ckim-gatkSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
55.5556
80800
ckim-gatkSNPtifunc_cdshomalt
99.9051
99.8104
100.0000
20.1183
526510526500
ckim-gatkSNPtilowcmp_AllRepeats_51to200bp_gt95identity_merged*
99.1672
98.9840
99.3511
65.9333
3215333215218
38.0952
ckim-gatkSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
98.9370
98.8636
99.0104
68.9077
2001232001207
35.0000