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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 348 349 350 351 352 353 354 355 356 ... 1720 1721 » 17551-17600 / 86044 show all
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7545	99.7818	99.7273	51.7500	3658	8	3657	10	10	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	*	97.6637	96.7532	98.5915	61.0394	1192	40	1190	17	16	94.1176
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	97.6256	97.1429	98.1132	79.1104	374	11	364	7	6	85.7143
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.5768	95.8462	99.3711	22.4390	623	27	632	4	4	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.9823	98.9848	97.0000	60.1594	195	2	194	6	6	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.7914	99.7547	99.8281	43.5620	4067	10	4065	7	3	42.8571
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.7593	99.7812	99.7374	46.7118	2280	5	2279	6	2	33.3333
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5664	99.3506	99.7831	28.4161	459	3	460	1	1	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9248	99.8496	100.0000	41.9185	1328	2	1326	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	95.3020	94.6667	95.9459	62.8141	71	4	71	3	2	66.6667
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	96.2963	100.0000	92.8571	86.5385	13	0	13	1	0	0.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.7447	91.8367	100.0000	21.0526	45	4	45	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	60.5263	13	0	13	2	2	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D1_5	map_l100_m0_e0	*	96.8796	97.3349	96.4286	86.1120	840	23	837	31	4	12.9032
ckim-dragen	INDEL	D1_5	map_l100_m0_e0	het	96.3955	97.6311	95.1907	86.7502	577	14	574	29	2	6.8966
ckim-dragen	INDEL	D1_5	map_l100_m0_e0	hetalt	88.0000	78.5714	100.0000	93.5294	11	3	11	0	0
ckim-dragen	INDEL	D1_5	map_l100_m0_e0	homalt	98.4375	97.6744	99.2126	83.3878	252	6	252	2	2	100.0000
ckim-dragen	INDEL	D1_5	map_l100_m1_e0	*	97.5455	97.9437	97.1505	85.1212	1810	38	1807	53	6	11.3208
ckim-gatk	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	ti	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	ti	tech_badpromoters	*	98.8235	98.8235	98.8235	44.8052	84	1	84	1	1	100.0000
ckim-gatk	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	47.5610	43	1	43	0	0
ckim-gatk	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	41.6667	41	0	41	1	1	100.0000
ckim-gatk	SNP	tv	*	*	99.5705	99.3991	99.7425	27.2376	963863	5827	963776	2488	84	3.3762
ckim-gatk	SNP	tv	*	het	99.5973	99.6088	99.5858	30.9441	589381	2315	589308	2451	61	2.4888
ckim-gatk	SNP	tv	*	hetalt	98.6111	97.8186	99.4166	53.8999	852	19	852	5	4	80.0000
ckim-gatk	SNP	tv	*	homalt	99.5305	99.0738	99.9914	20.3623	373630	3493	373616	32	19	59.3750
ckim-gatk	SNP	tv	HG002complexvar	*	99.5164	99.0689	99.9680	22.5419	243860	2292	243768	78	28	35.8974
ckim-gatk	SNP	tv	HG002complexvar	het	99.7094	99.4639	99.9560	22.1876	149923	808	149845	66	19	28.7879
ckim-gatk	SNP	tv	HG002complexvar	hetalt	98.0328	96.4516	99.6667	39.8798	299	11	299	1	1	100.0000
ckim-gatk	SNP	tv	HG002complexvar	homalt	99.2138	98.4513	99.9883	23.0317	93638	1473	93624	11	8	72.7273
ckim-gatk	SNP	tv	HG002compoundhet	*	99.2966	98.8905	99.7061	49.4688	8824	99	8821	26	17	65.3846
ckim-gatk	SNP	tv	HG002compoundhet	het	99.2595	98.9728	99.5478	55.8932	4625	48	4623	21	13	61.9048
ckim-gatk	SNP	tv	HG002compoundhet	hetalt	98.8856	97.7958	100.0000	22.8728	843	19	843	0	0
ckim-gatk	SNP	tv	HG002compoundhet	homalt	99.4517	99.0555	99.8512	42.9154	3356	32	3355	5	4	80.0000
ckim-gatk	SNP	tv	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	tv	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	tv	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0

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