PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16001-16050 / 86044 show all
ckim-dragenSNPti*hetalt
99.1507
99.8282
98.4823
48.3899
581158499
100.0000
ckim-dragenSNPti*homalt
99.9710
99.9493
99.9928
15.7227
8026314078027385851
87.9310
ckim-dragenSNPtiHG002complexvar*
99.9317
99.9245
99.9389
17.8695
508052384508287311156
50.1608
ckim-dragenSNPtiHG002complexvarhet
99.9189
99.9266
99.9111
17.5776
314535231314661280125
44.6429
ckim-dragenSNPtiHG002complexvarhetalt
99.7579
99.5169
100.0000
39.2442
206120900
ckim-dragenSNPtiHG002complexvarhomalt
99.9527
99.9214
99.9840
18.3095
1933111521934173131
100.0000
ckim-dragenSNPtiHG002compoundhet*
99.7941
99.8055
99.7828
35.8899
1744434174573818
47.3684
ckim-dragenSNPtiHG002compoundhethet
99.7319
99.7265
99.7373
40.1998
9479269491255
20.0000
ckim-dragenSNPtiHG002compoundhethetalt
99.9136
99.8273
100.0000
21.5739
578157800
ckim-dragenSNPtiHG002compoundhethomalt
99.8648
99.9053
99.8243
30.4352
7387773881313
100.0000
ckim-dragenSNPtidecoy*
0.0000
100.0000
00000
ckim-dragenSNPtidecoyhet
0.0000
100.0000
00000
ckim-dragenSNPtidecoyhetalt
0.0000
100.0000
00000
ckim-dragenSNPtidecoyhomalt
0.0000
100.0000
00000
ckim-dragenSNPtifunc_cds*
99.6097
99.9637
99.2582
28.1352
137825137821031
0.9709
ckim-dragenSNPtifunc_cdshet
99.3804
99.9647
98.8029
32.2466
8501385011031
0.9709
ckim-dragenSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
57.8947
80800
ckim-dragenSNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.1424
52732527300
ckim-dragenSNPtilowcmp_AllRepeats_51to200bp_gt95identity_merged*
98.7329
97.9988
99.4780
65.5490
3183653240175
29.4118
ckim-dragenSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
98.6398
98.0237
99.2636
68.7768
1984402022153
20.0000
ckim-dragenSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
98.8879
97.9575
99.8361
58.2906
119925121822
100.0000
ckim-dragenSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.7964
99.8426
99.7503
54.7629
2791544279637023
32.8571
ckim-dragenSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.7569
99.8600
99.6542
57.5039
1782625178656215
24.1935
ckim-dragenSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
87.8049
51500
ckim-dragenSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.8713
99.8218
99.9208
48.8376
10084181009388
100.0000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331*
98.9719
99.1684
98.7761
70.4653
308842593107338549
12.7273
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331het
98.6551
99.1981
98.1180
73.7453
194221571955137540
10.6667
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.2963
100.0000
92.8571
87.8261
1201311
100.0000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.5178
99.1170
99.9219
62.2385
114501021150998
88.8889
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.8470
98.2089
99.4934
48.2524
2906532946154
26.6667
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.7983
98.3069
99.2946
51.3464
1800311830132
15.3846
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.9274
98.0496
99.8211
42.1025
110622111622
100.0000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-dragenINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
ckim-dragenINDELI16_PLUSmap_l250_m1_e0*
66.6667
100.0000
50.0000
98.3333
10110
0.0000
ckim-dragenINDELI16_PLUSmap_l250_m1_e0het
66.6667
100.0000
50.0000
97.8947
10110
0.0000
ckim-dragenINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
ckim-dragenINDELI16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
ckim-dragenINDELI16_PLUSmap_l250_m2_e0*
66.6667
100.0000
50.0000
98.5612
10110
0.0000
ckim-dragenINDELI16_PLUSmap_l250_m2_e0het
66.6667
100.0000
50.0000
98.1481
10110
0.0000
ckim-dragenINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000