PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
15951-16000 / 86044 show all
ckim-dragenSNP*map_l150_m0_e0*
97.7617
98.3627
97.1680
81.2391
118351971183734542
12.1739
ckim-dragenSNP*map_l150_m0_e0het
96.9776
97.9975
95.9788
84.1657
7781159778132626
7.9755
ckim-dragenSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.5455
30300
ckim-dragenSNP*map_l150_m0_e0homalt
99.3015
99.0707
99.5334
70.2317
40513840531916
84.2105
ckim-dragenSNP*map_l150_m1_e0*
98.2024
98.8631
97.5505
76.7332
302613483026776093
12.2368
ckim-dragenSNP*map_l150_m1_e0het
97.4659
98.6591
96.3012
80.3004
190572591905873268
9.2896
ckim-dragenSNP*map_l150_m1_e0hetalt
97.4359
95.0000
100.0000
84.6774
1911900
ckim-dragenSNP*map_l150_m1_e0homalt
99.4842
99.2194
99.7504
65.7675
1118588111902825
89.2857
ckim-dragenSNP*map_l150_m2_e0*
98.2382
98.8980
97.5872
78.4892
315013513150777994
12.0668
ckim-dragenSNP*map_l150_m2_e0het
97.5195
98.7086
96.3588
81.7586
198732601987475169
9.1878
ckim-dragenSNP*map_l150_m2_e0hetalt
97.4359
95.0000
100.0000
86.7133
1911900
ckim-dragenSNP*map_l150_m2_e0homalt
99.4944
99.2307
99.7595
68.4345
1160990116142825
89.2857
ckim-dragenSNP*map_l150_m2_e1*
98.2286
98.8948
97.5714
78.5708
318543563186079396
12.1059
ckim-dragenSNP*map_l150_m2_e1het
97.5066
98.7084
96.3337
81.8435
201002632010176571
9.2811
ckim-dragenSNP*map_l150_m2_e1hetalt
97.4359
95.0000
100.0000
86.7133
1911900
ckim-dragenSNP*map_l150_m2_e1homalt
99.4914
99.2221
99.7621
68.4589
1173592117402825
89.2857
ckim-dragenSNP*map_l250_m0_e0*
96.2167
96.4871
95.9478
93.2896
2060752060879
10.3448
ckim-dragenSNP*map_l250_m0_e0het
95.1276
95.2855
94.9702
94.2264
1435711435761
1.3158
ckim-dragenSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-dragenSNP*map_l250_m0_e0homalt
98.8142
99.3641
98.2704
89.0250
6254625118
72.7273
ckim-dragenSNP*map_l250_m1_e0*
97.2004
97.5768
96.8269
89.0554
7047175704923129
12.5541
ckim-dragenSNP*map_l250_m1_e0het
96.2090
96.8454
95.5809
90.7991
4605150460721314
6.5728
ckim-dragenSNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
94.2857
40400
ckim-dragenSNP*map_l250_m1_e0homalt
99.1258
98.9850
99.2671
82.5332
24382524381815
83.3333
ckim-dragenSNP*map_l250_m2_e0*
97.2970
97.6791
96.9179
89.7648
7702183770424531
12.6531
ckim-dragenSNP*map_l250_m2_e0het
96.3481
96.9965
95.7083
91.3532
5038156504022615
6.6372
ckim-dragenSNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
93.8272
50500
ckim-dragenSNP*map_l250_m2_e0homalt
99.1424
98.9948
99.2905
83.9458
26592726591916
84.2105
ckim-dragenSNP*map_l250_m2_e1*
97.2818
97.6712
96.8956
89.8498
7801186780325032
12.8000
ckim-dragenSNP*map_l250_m2_e1het
96.3314
96.9985
95.6733
91.4307
5106158510823116
6.9264
ckim-dragenSNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
93.8272
50500
ckim-dragenSNP*map_l250_m2_e1homalt
99.1340
98.9698
99.2986
84.0205
26902826901916
84.2105
ckim-dragenSNP*map_siren*
98.9989
99.5042
98.4987
58.4236
1455037251455172218229
10.3246
ckim-dragenSNP*map_sirenhet
98.5668
99.4945
97.6562
62.5377
90531460905412173189
8.6977
ckim-dragenSNP*map_sirenhetalt
97.5610
98.7654
96.3855
74.6177
8018032
66.6667
ckim-dragenSNP*map_sirenhomalt
99.7220
99.5214
99.9236
48.9049
54892264548964238
90.4762
ckim-dragenSNP*segdup*
98.4991
99.8219
97.2109
92.1838
28017502802280414
1.7413
ckim-dragenSNP*segduphet
97.6498
99.7863
95.6029
93.5624
1728037172857955
0.6289
ckim-dragenSNP*segduphetalt
93.3333
100.0000
87.5000
97.7716
70711
100.0000
ckim-dragenSNP*segduphomalt
99.9022
99.8790
99.9255
87.7402
10730131073088
100.0000
ckim-dragenSNP*segdupwithalt*
0.0000
100.0000
00000
ckim-dragenSNP*segdupwithalthet
0.0000
100.0000
00000
ckim-dragenSNP*segdupwithalthetalt
0.0000
100.0000
00000
ckim-dragenSNP*segdupwithalthomalt
0.0000
100.0000
00000
ckim-dragenSNP*tech_badpromoters*
98.0769
97.4522
98.7097
43.8406
153415322
100.0000
ckim-dragenSNP*tech_badpromotershet
98.0132
96.1039
100.0000
39.3443
7437400
ckim-dragenSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ckim-dragenSNP*tech_badpromotershomalt
98.1366
98.7500
97.5309
47.4026
7917922
100.0000
ckim-dragenSNPti**
99.8327
99.9538
99.7120
20.2602
208454796420848166022378
6.2770
ckim-dragenSNPti*het
99.7466
99.9566
99.5375
22.8315
128133555612814945955318
5.3401